RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 LRRTM1Q86UE6 522 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 OR10K1Q8NGX5 313 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 TMEM203Q969S6 136 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 MUL1Q969V5 352 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 C1orf147Q96MC9 270 aaPredicted RBP11.66□□□□□ -0.54
HDDC2-209ENST00000609477 CST11Q9H112 138 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 DPAGT1Q9H3H5 408 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 NDUFB11Q9NX14 153 aa11.66□□□□□ -0.54
HDDC2-209ENST00000609477 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 MEIOCA2RUB1 952 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF729A6NN14 1252 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 GEMIN2O14893 280 aaKnown RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 CLPXO76031 633 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 PAHP00439 452 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 GLAP06280 429 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 MELTFP08582 738 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 SAA4P35542 130 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 IER3P46695 156 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 LGALS4P56470 323 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 AANATQ16613 207 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 HEPN1Q6WQI6 88 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 TCF23Q7RTU1 214 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 OR4D6Q8NGJ1 314 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 DPCDQ9BVM2 203 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
HDDC2-209ENST00000609477 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
HDDC2-209ENST00000609477 TMEM89A2RUT3 159 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 CCRL2O00421 344 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 HTR2CP28335 458 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 GLIPR1P48060 266 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 FABP5Q01469 135 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 KLRD1Q13241 179 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 FAM27D1Q5T7N8 215 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 SLC35E4Q6ICL7 350 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
HDDC2-209ENST00000609477 SUMF2Q8NBJ7 301 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 OR6M1Q8NGM8 313 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 OR5R1Q8NH85 324 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 COQ2Q96H96 371 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 PPIL3Q9H2H8 161 aaKnown RBP11.64□□□□□ -0.55
HDDC2-209ENST00000609477 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
HDDC2-209ENST00000609477 SOX21Q9Y651 276 aaPredicted RBP11.64□□□□□ -0.55
HDDC2-209ENST00000609477 TRAV1-2A0A0B4J238 106 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 TRDV1A0A1B0GX56 115 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 SLC22A1O15245 554 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 CA11O75493 328 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 BPNT1O95861 308 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 HKR1P10072 659 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 MGMTP16455 207 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 GZMHP20718 246 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 ACTG1P63261 375 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 FOXL1Q12952 345 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-209ENST00000609477 SSX1Q16384 188 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 RSBN1Q5VWQ0 802 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-209ENST00000609477 ZNF626Q68DY1 528 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 PNKDQ8N490 385 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 OR10A7Q8NGE5 316 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 KCNG3Q8TAE7 436 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 DYRK2Q92630 601 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 GCDHQ92947 438 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-209ENST00000609477 MALSU1Q96EH3 234 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 NKX3-1Q99801 234 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-209ENST00000609477 TMEM133Q9H2Q1 129 aa11.63□□□□□ -0.55
HDDC2-209ENST00000609477 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
HDDC2-209ENST00000609477 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 A0A087X0M5 115 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 A0A1B0GX30 115 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 MCRIP1C9JLW8 97 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 CRTAPO75718 401 aaPredicted RBP11.62□□□□□ -0.55
HDDC2-209ENST00000609477 CGB3P0DN86 165 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 CGB7P0DN87 165 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 FUT3P21217 361 aa11.62□□□□□ -0.55
HDDC2-209ENST00000609477 CALRP27797 417 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms