RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 LRRTM1Q86UE6 522 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 OR10K1Q8NGX5 313 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 TMEM203Q969S6 136 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 MUL1Q969V5 352 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 C1orf147Q96MC9 270 aaPredicted RBP11.66□□□□□ -0.54
HDDC2-206ENST00000608461 CST11Q9H112 138 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 DPAGT1Q9H3H5 408 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 NDUFB11Q9NX14 153 aa11.66□□□□□ -0.54
HDDC2-206ENST00000608461 A0A0U1RQK1 487 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 MEIOCA2RUB1 952 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 ZNF729A6NN14 1252 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 GEMIN2O14893 280 aaKnown RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 CLPXO76031 633 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 PAHP00439 452 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 GLAP06280 429 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 MELTFP08582 738 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 SAA4P35542 130 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 IER3P46695 156 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 LGALS4P56470 323 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 AANATQ16613 207 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 CD200R1LQ6Q8B3 271 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 HEPN1Q6WQI6 88 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 TCF23Q7RTU1 214 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 OR4D6Q8NGJ1 314 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 DPCDQ9BVM2 203 aaPredicted RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
HDDC2-206ENST00000608461 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
HDDC2-206ENST00000608461 TMEM89A2RUT3 159 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 CCRL2O00421 344 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 HTR2CP28335 458 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 GLIPR1P48060 266 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 FABP5Q01469 135 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 KLRD1Q13241 179 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 FAM27D1Q5T7N8 215 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 SLC35E4Q6ICL7 350 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.64□□□□□ -0.55
HDDC2-206ENST00000608461 SUMF2Q8NBJ7 301 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 OR6M1Q8NGM8 313 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 OR5R1Q8NH85 324 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 COQ2Q96H96 371 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 PPIL3Q9H2H8 161 aaKnown RBP11.64□□□□□ -0.55
HDDC2-206ENST00000608461 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
HDDC2-206ENST00000608461 SOX21Q9Y651 276 aaPredicted RBP11.64□□□□□ -0.55
HDDC2-206ENST00000608461 TRAV1-2A0A0B4J238 106 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 TRDV1A0A1B0GX56 115 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 BTBD17A6NE02 478 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 SLC22A1O15245 554 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 CA11O75493 328 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 BPNT1O95861 308 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 HKR1P10072 659 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 MGMTP16455 207 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 GZMHP20718 246 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 ACTG1P63261 375 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 FOXL1Q12952 345 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-206ENST00000608461 SSX1Q16384 188 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 RSBN1Q5VWQ0 802 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-206ENST00000608461 ZNF626Q68DY1 528 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 PNKDQ8N490 385 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 OR10A7Q8NGE5 316 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 KCNG3Q8TAE7 436 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 DYRK2Q92630 601 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 GCDHQ92947 438 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-206ENST00000608461 MALSU1Q96EH3 234 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 NKX3-1Q99801 234 aaPredicted RBP11.63□□□□□ -0.55
HDDC2-206ENST00000608461 TMEM133Q9H2Q1 129 aa11.63□□□□□ -0.55
HDDC2-206ENST00000608461 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
HDDC2-206ENST00000608461 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 A0A087X0M5 115 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 A0A1B0GX30 115 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 MCRIP1C9JLW8 97 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 CRTAPO75718 401 aaPredicted RBP11.62□□□□□ -0.55
HDDC2-206ENST00000608461 CGB3P0DN86 165 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 CGB7P0DN87 165 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 FUT3P21217 361 aa11.62□□□□□ -0.55
HDDC2-206ENST00000608461 CALRP27797 417 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms