RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 RHOXF1Q8NHV9 184 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 CAPSLQ8WWF8 208 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 SGCDQ92629 289 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 ISG20L2Q9H9L3 353 aaKnown RBP12.08□□□□□ -0.48
SMG9-213ENST00000602222 MRPS18AQ9NVS2 196 aaKnown RBP12.08□□□□□ -0.48
SMG9-213ENST00000602222 AASSQ9UDR5 926 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 ZNF281Q9Y2X9 895 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 GMPPBQ9Y5P6 360 aa12.08□□□□□ -0.48
SMG9-213ENST00000602222 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A18PA6NE21 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A16PA6NEW6 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A20PA6NIJ5 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A12PA8MX19 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A5PA8MXJ8 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 M0QZK8 103 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 MPZL2O60487 215 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FADS2O95864 444 aaKnown RBP12.07□□□□□ -0.48
SMG9-213ENST00000602222 HCKP08631 526 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A15PP0C7V4 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A13PP0C7W8 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A14PP0C7W9 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 FAM90A24PP0C7X0 464 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 MNDAP41218 407 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 ABCA11PQ4W5N1 156 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 ZNF691Q5VV52 312 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 PQLC1Q8N2U9 271 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 CBR4Q8N4T8 237 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 ZNF565Q8N9K5 539 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 OR9G1Q8NH87 305 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 OR5AK2Q8NH90 309 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 HAVCR2Q8TDQ0 301 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 KIRREL1Q96J84 757 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 Q96MT0 163 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 PPIL3Q9H2H8 161 aaKnown RBP12.07□□□□□ -0.48
SMG9-213ENST00000602222 PCDHB16Q9NRJ7 776 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
SMG9-213ENST00000602222 ERVK13-1Q9NX77 482 aa12.07□□□□□ -0.48
SMG9-213ENST00000602222 TCRBV4S1A1TA0A5B7 111 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 FAM172BPA6NC97 362 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 E9PI62 339 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 CASQ2O14958 399 aaPredicted RBP12.06□□□□□ -0.48
SMG9-213ENST00000602222 LPLP06858 475 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 CD33P20138 364 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 RAB40BQ12829 278 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
SMG9-213ENST00000602222 UTF1Q5T230 341 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 FOXB2Q5VYV0 432 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 ASCL4Q6XD76 172 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 CNIH3Q8TBE1 160 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 MYDGFQ969H8 173 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 CPNE2Q96FN4 548 aaPredicted RBP12.06□□□□□ -0.48
SMG9-213ENST00000602222 PDCD1LG2Q9BQ51 273 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 DHDHQ9UQ10 334 aa12.06□□□□□ -0.48
SMG9-213ENST00000602222 TRAV24A0A0B4J272 114 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 H0YJX3 145 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 PF4V1P10720 104 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 C21orf33P30042 268 aaPredicted RBP12.05□□□□□ -0.48
SMG9-213ENST00000602222 OR3A4PP47883 348 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 KCNJ3P48549 501 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 GBX2P52951 348 aaPredicted RBP12.05□□□□□ -0.48
SMG9-213ENST00000602222 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 OR4X2Q8NGF9 303 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 BARHL1Q9BZE3 327 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 AMBNQ9NP70 447 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 ING3Q9NXR8 418 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 KIF25Q9UIL4 384 aa12.05□□□□□ -0.48
SMG9-213ENST00000602222 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
SMG9-213ENST00000602222 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 J3QR06 171 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 BAG2O95816 211 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 IL1AP01583 271 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 IGLL1P15814 213 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 RAB3AP20336 220 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 NFYBP25208 207 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 VHLP40337 213 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 PAN3Q58A45 887 aaKnown RBP12.04□□□□□ -0.48
SMG9-213ENST00000602222 RSBN1Q5VWQ0 802 aaPredicted RBP12.04□□□□□ -0.48
SMG9-213ENST00000602222 OSR2Q8N2R0 312 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 OR10A7Q8NGE5 316 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 OR52I1Q8NGK6 324 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 RPEQ96AT9 228 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
SMG9-213ENST00000602222 C9orf16Q9BUW7 83 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 JAM3Q9BX67 310 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 IDI2-AS1Q9NZ38 188 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 MOB4Q9Y3A3 225 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
SMG9-213ENST00000602222 HSPE1-MOB4S4R3N1 261 aa12.04□□□□□ -0.48
SMG9-213ENST00000602222 LOC100130705A0A1B0GUX0 176 aa12.03□□□□□ -0.48
SMG9-213ENST00000602222 GABRPO00591 440 aa12.03□□□□□ -0.48
SMG9-213ENST00000602222 MAGEB3O15480 346 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms