RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 FAM86C1Q9NVL1 165 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 COA4Q9NYJ1 87 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 MTCH1Q9NZJ7 389 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 FAM186AA6NE01 2351 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 C7orf77A4D0Y5 90 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 M0R036 132 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 SLC33A1O00400 549 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 SSSCA1O60232 199 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 NAPSAO96009 420 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 ZNF44P15621 663 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 LMO1P25800 156 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 FGF12P61328 243 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 LPAL2Q16609 132 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 CXorf66Q5JRM2 361 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 ZNF565Q8N9K5 539 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 HIST1H2BAQ96A08 127 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 TMEM56Q96MV1 263 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 SIGLEC12Q96PQ1 595 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 STRAPQ9Y3F4 350 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 TMEM56-RWDD3S4R434 201 aa17.35■□□□□ 0.37
SHKBP1-225ENST00000600733 ADAM20O43506 726 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 LHX2P50458 406 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 RAB5CP51148 216 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 SRPXP78539 464 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 NRN1LQ496H8 165 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 MRPL21Q7Z2W9 205 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 SELENOHQ8IZQ5 122 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 FAM185AQ8N0U4 392 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 NEK7Q8TDX7 302 aa17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 BOKQ9UMX3 212 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-225ENST00000600733 IGKV3D-15A0A087WSY6 115 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 SLC22A20A6NK97 555 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 ZNF732B4DXR9 585 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 C3orf80F5H4A9 247 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 HSD17B6O14756 317 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 LAMTOR5O43504 91 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 NXPH3O95157 252 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 NGFP01138 241 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 ZDHHC23Q8IYP9 409 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 SFT2D1Q8WV19 159 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 TMEM171Q8WVE6 324 aa17.33■□□□□ 0.37
SHKBP1-225ENST00000600733 FAM90A10PA6NDY2 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A18PA6NE21 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A16PA6NEW6 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A20PA6NIJ5 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A8PA6NJQ4 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A7PA6NKC0 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A22PA8MWA6 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A12PA8MX19 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A5PA8MXJ8 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A23PA8MXZ1 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 UMAD1C9J7I0 102 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 K7N7A8 449 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 NEURL1O76050 574 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A15PP0C7V4 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A13PP0C7W8 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A14PP0C7W9 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM90A24PP0C7X0 464 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 PAX6P26367 422 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 CEACAM21Q3KPI0 293 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 Q6ZS49 121 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 LILRB1Q8NHL6 650 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 ABHD14AQ9BUJ0 271 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 EGLN1Q9GZT9 426 aa17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 ZNF552Q9H707 407 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 ZNF703Q9H7S9 590 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 COL27A1Q8IZC6 1860 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-225ENST00000600733 IGKV1-6A0A0C4DH72 117 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 ZNF724A8MTY0 619 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 GPR37O15354 613 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 SYNGR1O43759 233 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 FOLR2P14207 255 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 OR2M7Q8NG81 312 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 CCL28Q9NRJ3 127 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 ATPIF1Q9UII2 106 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM166BA8MTA8 275 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 TNFSF12O43508 249 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 OR13C7P0DN81 318 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 ATP6V0CP27449 155 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 CLDN18P56856 261 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 LINC00470Q9BZP3 86 aa17.32■□□□□ 0.36
SHKBP1-225ENST00000600733 PTAFRP25105 342 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 RAB5BP61020 215 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 SNRPEP62304 92 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 ZXDAP98168 799 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TCEAL6Q6IPX3 200 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 ZFP62Q8NB50 900 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 OR2G3Q8NGZ4 309 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 CD300LFQ8TDQ1 290 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TCEAL3Q969E4 200 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 ZNF488Q96MN9 340 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 RARRES2Q99969 163 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 GLRX2Q9NS18 164 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 A0A1W2PPH5 198 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 A6NLC8 198 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 CDRT15L2A8MXV6 281 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 PROB1E7EW31 1015 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TRAPPC2LH3BP13 241 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms