RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RSBN1Q5VWQ0 802 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 TCF23Q7RTU1 214 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 CMTM4Q8IZR5 234 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 SAMD12Q8N8I0 201 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 LY6G5BQ8NDX9 201 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 OR56B1Q8NGI3 324 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 OR10R2Q8NGX6 335 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 C8orf46Q8TAG6 207 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 RAB40AQ8WXH6 277 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 ACOT12Q8WYK0 555 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 TMEM186Q96B77 213 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 ARHGAP5-AS1Q96IT6 56 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 NUDT16L1Q9BRJ7 211 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 FAAP24Q9BTP7 215 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 ZNF469Q96JG9 3925 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 F8P00451 2351 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 METTL21EPA6NDL7 271 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 HPGDSO60760 199 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 ECDO95905 644 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 EIF4EP06730 217 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 FOSL1P15407 271 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 ERP29P30040 261 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 KCNJ3P48549 501 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 ZNF273Q14593 569 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 KRBOX4Q5JUW0 171 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 CD276Q5ZPR3 534 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 OLFML2AQ68BL7 652 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 FAM185AQ8N0U4 392 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 NEK7Q8TDX7 302 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 AP3S1Q92572 193 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 PECRQ9BY49 303 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 HIF1ANQ9NWT6 349 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 INSIG2Q9Y5U4 225 aa16.51■□□□□ 0.23
SHKBP1-222ENST00000600320 FLNAP21333 2647 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 TRBV23-1A0A0A0MS06 115 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 TRAV20A0A0B4J274 112 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 PPIAL4CA0A0B4J2A2 164 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 KIR2DS1A0A191URI9 304 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 ENSAO43768 121 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 CD5LO43866 347 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 LY6G6DO95868 133 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 GLAP06280 429 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 PPIAL4GP0DN37 164 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 RPL31P62899 125 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 C11orf91Q3C1V1 193 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 UBE2NLQ5JXB2 153 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 TMEM200BQ69YZ2 307 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 Q6ZTK2 550 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 GLCCI1Q86VQ1 547 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 DTX3Q8N9I9 347 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 RAB3CQ96E17 227 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 ABCG5Q9H222 651 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 PLEKHJ1Q9NW61 149 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 ETAA1Q9NY74 926 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 KIF25Q9UIL4 384 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 HSF4Q9ULV5 492 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 KCNK7Q9Y2U2 307 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 ACANP16112 2415 aa16.5■□□□□ 0.23
SHKBP1-222ENST00000600320 TRAV39A0A0B4J263 110 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 ODAMA1E959 279 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 H3BUI4 141 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 MFNGO00587 321 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 CTDSP2O14595 271 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 RBM39Q14498 530 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 FAM189A2Q15884 450 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 SLC35E4Q6ICL7 350 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 MZT2AQ6P582 158 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 IZUMO1Q8IYV9 350 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 NXF2Q9GZY0 626 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 MIXL1Q9H2W2 232 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 GSX1Q9H4S2 264 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 ZMAT3Q9HA38 289 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 AK3Q9UIJ7 227 aa16.49■□□□□ 0.23
SHKBP1-222ENST00000600320 HIVEP1P15822 2718 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 A0A075B6Q4 140 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 A0A1W2PQ09 198 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 MT-ND4P03905 459 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 HIST1H1DP16402 221 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 GNB3P16520 340 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 CCL3L1P16619 93 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 PAX5Q02548 391 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 ZNF497Q6ZNH5 498 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 HDHD3Q9BSH5 251 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 BATF3Q9NR55 127 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 ELF5Q9UKW6 265 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 DSCAML1Q8TD84 2053 aa16.48■□□□□ 0.23
SHKBP1-222ENST00000600320 CSPG4Q6UVK1 2322 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 MEIKINA0A087WXM9 373 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 TMEM30CPA0ZSE6 113 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 FUOMA2VDF0 154 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 LIPFP07098 398 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 ELK1P19419 428 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 CDK2P24941 298 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 MEF2CQ06413 473 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 PAX8Q06710 450 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 DCAF12L2Q5VW00 463 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 BTNL3Q6UXE8 466 aa16.47■□□□□ 0.23
SHKBP1-222ENST00000600320 Q6ZPA2 131 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms