RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 LIMS1P48059 325 aa12.75□□□□□ -0.37
SYMPK-215ENST00000600237 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
SYMPK-215ENST00000600237 CA10Q9NS85 328 aa12.75□□□□□ -0.37
SYMPK-215ENST00000600237 FSTP19883 344 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 ZP4Q12836 540 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 TMEM183BQ1AE95 376 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 ACSM6Q6P461 480 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 GAPTQ8N292 157 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 OR2H1Q9GZK4 316 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 WNK3Q9BYP7 1800 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 MFNGO00587 321 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 RBP4P02753 201 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 S100A4P26447 101 aaKnown RBP12.74□□□□□ -0.37
SYMPK-215ENST00000600237 SULT1A1P50225 295 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 NAAAQ02083 359 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 DHRS7BQ6IAN0 325 aaPredicted RBP12.74□□□□□ -0.37
SYMPK-215ENST00000600237 OR2M3Q8NG83 312 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 OR5A2Q8NGI9 324 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 GHITMQ9H3K2 345 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 THYN1Q9P016 225 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 VAX2Q9UIW0 290 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 GOLT1BQ9Y3E0 138 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
SYMPK-215ENST00000600237 WDR54Q9H977 334 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 SIRT7Q9NRC8 400 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 TNFSF18Q9UNG2 199 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 SIRT4Q9Y6E7 314 aaPredicted RBP12.74□□□□□ -0.37
SYMPK-215ENST00000600237 TRAV20A0A0B4J274 112 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 SPAARA0A1B0GVQ0 90 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 MED19A0JLT2 244 aaPredicted RBP12.74□□□□□ -0.37
SYMPK-215ENST00000600237 C7orf77A4D0Y5 90 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 ZNF785A8K8V0 405 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 PNLIPP16233 465 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 HFEQ30201 348 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 ANAPC16Q96DE5 110 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 LOXL4Q96JB6 756 aa12.74□□□□□ -0.37
SYMPK-215ENST00000600237 IGHV3-43A0A0B4J1X8 118 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 KIAA1324LA8MWY0 1029 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 GYPAP02724 150 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 IGHV3-43DP0DP04 118 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 CCKARP32238 428 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 NANOS3P60323 173 aaKnown RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 PRRX1P54821 245 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 RPS4XP62701 263 aaKnown RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 MRPS11P82912 194 aaKnown RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 LINC00596Q86U02 117 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 R3HDM4Q96D70 268 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 MISP3Q96FF7 219 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 FOCADQ5VW36 1801 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 CENPVL1A0A0U1RR11 272 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 A0A1B0GU03 582 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 IGF2P01344 180 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 BMP5P22003 454 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 EFNB2P52799 333 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 FGF8P55075 233 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 EWSR1Q01844 656 aaKnown RBP eCLIP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 CD200R1LQ6Q8B3 271 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 HES7Q9BYE0 225 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 AMDHD2Q9Y303 409 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 A0A1W2PNV4 684 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 PMS2P11Q13670 270 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 BTNL3Q6UXE8 466 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 SMDT1Q9H4I9 107 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
SYMPK-215ENST00000600237 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 OR2W1Q9Y3N9 320 aa12.73□□□□□ -0.37
SYMPK-215ENST00000600237 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 GTF2H5Q6ZYL4 71 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 MRGPRGQ86SM5 289 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 DTX4Q9Y2E6 619 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 AMMECR1Q9Y4X0 333 aaPredicted RBP12.72□□□□□ -0.37
SYMPK-215ENST00000600237 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 TMIGD3P0DMS9 266 aaPredicted RBP12.72□□□□□ -0.37
SYMPK-215ENST00000600237 BMI1P35226 326 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
SYMPK-215ENST00000600237 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms