RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR10K2Q6IF99 312 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 PPP1R35Q8TAP8 253 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 ZNF418Q8TF45 676 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 DPCDQ9BVM2 203 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 NCOR1P1Q9H4R4 102 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 GHRLQ9UBU3 117 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 UBE2J1Q9Y385 318 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 hADV38S2A0JD32 116 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 SLC17A2O00624 439 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 TNFAIP8O95379 198 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 IGHV1-8P0DP01 117 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 HTR2CP28335 458 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 FGF9P31371 208 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 GDNFP39905 211 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 NEDD8Q15843 81 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 C17orf58Q2M2W7 97 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 PAN3Q58A45 887 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 KRBOX4Q5JUW0 171 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 LDLRAD2Q5SZI1 272 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 NCR3LG1Q68D85 454 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 BRICD5Q6PL45 260 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 BAIAP2L2Q6UXY1 529 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 OR6M1Q8NGM8 313 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 C17orf50Q8WW18 174 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 ZNF714Q96N38 554 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 S100A13Q99584 98 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 TXNL4BQ9NX01 149 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 CMYA5Q8N3K9 4069 aa15.89■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A0A6YYD4 124 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A1W2PPH5 198 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 DNAJC9-AS1A6NH13 148 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 NPFFO15130 113 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 LDLRAD4O15165 306 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 OR7C1O76099 320 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 UBBP0CG47 229 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 OR10A3P58181 314 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 BLMHQ13867 455 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 UTF1Q5T230 341 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 C22orf42Q6IC83 251 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 Q6YL49 198 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 ZNF782Q6ZMW2 699 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 RTN4RL2Q86UN3 420 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 GAPTQ8N292 157 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 TSPAN14Q8NG11 270 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 OR13A1Q8NGR1 328 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 TM2D1Q9BX74 207 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 SELENOIQ9C0D9 397 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 OR51E2Q9H255 320 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 LINC00574Q9H8X3 128 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 KIF25Q9UIL4 384 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 STUB1Q9UNE7 303 aa15.88■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A1W2PRD5 423 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A1W2PRF3 423 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A1W2PRM7 423 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A10PA6NDY2 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A18PA6NE21 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A16PA6NEW6 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A20PA6NIJ5 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A8PA6NJQ4 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A7PA6NKC0 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FOXI3A8MTJ6 420 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A22PA8MWA6 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A12PA8MX19 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A5PA8MXJ8 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A23PA8MXZ1 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 ODF3BA8MYP8 253 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A15PP0C7V4 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A13PP0C7W8 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A14PP0C7W9 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM90A24PP0C7X0 464 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 SMIM18P0DKX4 95 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 KCNJ3P48549 501 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 UBA52P62987 128 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 GUCA2AQ02747 115 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 PLA2G7Q13093 441 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 SLC9A3R2Q15599 337 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 LDLRAD3Q86YD5 345 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 FAM46BQ96A09 425 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 SLITRK2Q9H156 845 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 PCDHB16Q9NRJ7 776 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 TAS2R3Q9NYW6 316 aa15.87■□□□□ 0.13
SHKBP1-221ENST00000599833 CLDN34H7C241 214 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 CRTAPO75718 401 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 BPNT1O95861 308 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 MELTFP08582 738 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 SAA4P35542 130 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 RPS27AP62979 156 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 P2RY14Q15391 338 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 SLC35E4Q6ICL7 350 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 ZFAND2BQ8WV99 257 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 DYRK2Q92630 601 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 NICN1Q9BSH3 213 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 FBLN5Q9UBX5 448 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 V9GY05 133 aa15.86■□□□□ 0.13
SHKBP1-221ENST00000599833 A0A087WXM4 84 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 FUOMA2VDF0 154 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 CLPXO76031 633 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 MPIG6BO95866 241 aa15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 JUNBP17275 347 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-221ENST00000599833 CLDN12P56749 244 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms