RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RPL15P61313 204 aaKnown RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 RPS25P62851 125 aaKnown RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 QRFPP83859 136 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 FABP5Q01469 135 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 AESQ08117 197 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 KLRD1Q13241 179 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 RSBN1Q5VWQ0 802 aaPredicted RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 C16orf87Q6PH81 154 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 GLIPR1L1Q6UWM5 242 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 HEPN1Q6WQI6 88 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 BEND2Q8NDZ0 799 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 SSMEM1Q8WWF3 244 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 MUL1Q969V5 352 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 SLC25A28Q96A46 364 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 GFI1Q99684 422 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 CCDC90BQ9GZT6 254 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 NDUFB11Q9NX14 153 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 ZNF581Q9P0T4 197 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 ZNRD1Q9P1U0 126 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 MRPS28Q9Y2Q9 187 aaKnown RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 SLC22A1O15245 554 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 HOXA3O43365 443 aaPredicted RBP14.34□□□□□ -0.11
USHBP1-209ENST00000598570 UBBP0CG47 229 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 HKR1P10072 659 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 CFPP27918 469 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 CD34P28906 385 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 SNU13P55769 128 aaKnown RBP14.34□□□□□ -0.11
USHBP1-209ENST00000598570 HSD17B12Q53GQ0 312 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 ZNF626Q68DY1 528 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 TPRX1Q8N7U7 411 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 TMEM104Q8NE00 496 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 TMEM203Q969S6 136 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 PPA2Q9H2U2 334 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 TCF7L1Q9HCS4 588 aa14.34□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1W2PP11 408 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 VGLL3A8MV65 326 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 NPIPB11E5RHQ5 1161 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.12
USHBP1-209ENST00000598570 CSTBP04080 98 aaKnown RBP14.33□□□□□ -0.12
USHBP1-209ENST00000598570 FBP1P09467 338 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 HSMCR30P0CW71 290 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.12
USHBP1-209ENST00000598570 SCN1BQ07699 218 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 EDDM3AQ14507 147 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 C17orf58Q2M2W7 97 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 KCTD21Q4G0X4 260 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 SLC22A6Q4U2R8 563 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 ZNF773Q6PK81 442 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 PNKDQ8N490 385 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 SVOPQ8N4V2 548 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 JAGN1Q8N5M9 183 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 FCGR1BQ92637 280 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 Q96M66 194 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 NR1H4Q96RI1 486 aaPredicted RBP14.33□□□□□ -0.12
USHBP1-209ENST00000598570 DPCDQ9BVM2 203 aaPredicted RBP14.33□□□□□ -0.12
USHBP1-209ENST00000598570 FAM192AQ9GZU8 254 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 OR6C3Q9NZP0 311 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 SESN1Q9Y6P5 492 aa14.33□□□□□ -0.12
USHBP1-209ENST00000598570 TRGV10A0A0A0MS01 117 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 TRAV1-2A0A0B4J238 106 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 KBTBD11-OT1A0A1B0GTJ5 212 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 TRDV1A0A1B0GX56 115 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 ZNF729A6NN14 1252 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-209ENST00000598570 MMP23AO75900 390 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 ARL6IP5O75915 188 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 PAN3Q58A45 887 aaKnown RBP14.32□□□□□ -0.12
USHBP1-209ENST00000598570 KRBOX4Q5JUW0 171 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 LDLRAD2Q5SZI1 272 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 GLT8D1Q68CQ7 371 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 SIGIRRQ6IA17 410 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 PDZD9Q8IXQ8 264 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 PLPPR1Q8TBJ4 325 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 PIFOQ8TCI5 191 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 ZDHHC16Q969W1 377 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 S100A13Q99584 98 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 BARHL1Q9BZE3 327 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 TMEM133Q9H2Q1 129 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 SPACA1Q9HBV2 294 aa14.32□□□□□ -0.12
USHBP1-209ENST00000598570 TBL2Q9Y4P3 447 aaKnown RBP14.32□□□□□ -0.12
USHBP1-209ENST00000598570 MEIOCA2RUB1 952 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 TMEM14DPA8MWL7 114 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 CLPXO76031 633 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 IGLV1-47P01700 117 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 SERPINA2P20848 420 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 FGF9P31371 208 aaPredicted RBP14.31□□□□□ -0.12
USHBP1-209ENST00000598570 ZNF497Q6ZNH5 498 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 SLC16A12Q6ZSM3 486 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 OR10A7Q8NGE5 316 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 OR13D1Q8NGV5 346 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 DYRK2Q92630 601 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 GAL3ST2Q9H3Q3 398 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 FAM96BQ9Y3D0 163 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 MMP24Q9Y5R2 645 aa14.31□□□□□ -0.12
USHBP1-209ENST00000598570 H3BUI4 141 aa14.3□□□□□ -0.12
USHBP1-209ENST00000598570 SLC17A2O00624 439 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms