RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 NDUFA2O43678 99 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 ECDO95905 644 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 NAPSAO96009 420 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 CSN2P05814 226 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 FCGR3AP08637 254 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 CSF1P09603 554 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L2P0CJ85 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L3P0CJ86 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L4P0CJ87 422 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L5P0CJ88 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L6P0CJ89 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L7P0CJ90 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 SELLP14151 372 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 TMEM33P57088 247 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 AP3S2P59780 193 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 AVPI1Q5T686 147 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4L9Q6RFH8 374 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 SLC36A1Q7Z2H8 476 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 FAM216BQ8N7L0 139 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 BARX1Q9HBU1 254 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 DUX4Q9UBX2 424 aa12.23□□□□□ -0.45
VRK3-212ENST00000596814 ZNF230Q9UIE0 474 aaPredicted RBP12.23□□□□□ -0.45
VRK3-212ENST00000596814 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 ANKRD20A5PA0PJZ0 165 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 H7C1Q1 480 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 ADAM20O43506 726 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 TK1P04183 234 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 ATP5J2P56134 94 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 DEFA1P59665 94 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 DEFA3P59666 94 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 KLF9Q13886 244 aaPredicted RBP12.22□□□□□ -0.45
VRK3-212ENST00000596814 ZNF497Q6ZNH5 498 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 HOGA1Q86XE5 327 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 MRPL30Q8TCC3 161 aaKnown RBP12.22□□□□□ -0.45
VRK3-212ENST00000596814 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
VRK3-212ENST00000596814 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
VRK3-212ENST00000596814 TMEM30CPA0ZSE6 113 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
VRK3-212ENST00000596814 MGST3O14880 152 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 SSX4O60224 188 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 GPR6P46095 362 aaPredicted RBP12.21□□□□□ -0.45
VRK3-212ENST00000596814 TAS2R19P59542 299 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 RSBN1Q5VWQ0 802 aaPredicted RBP12.21□□□□□ -0.45
VRK3-212ENST00000596814 GAPTQ8N292 157 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 OR5D13Q8NGL4 314 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 SETD6Q8TBK2 473 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 MAFIPQ8WZ33 124 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 SNAPC3Q92966 411 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 COQ2Q96H96 371 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 MED30Q96HR3 178 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 ST6GALNAC5Q9BVH7 336 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 KAAG1Q9UBP8 84 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 TBC1D24Q9ULP9 559 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 EDARQ9UNE0 448 aa12.21□□□□□ -0.45
VRK3-212ENST00000596814 FBN2P35556 2912 aa12.21□□□□□ -0.46
VRK3-212ENST00000596814 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 PAX1P15863 534 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 NAT1P18440 290 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 PDLIM4P50479 330 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 PAX5Q02548 391 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 AESQ08117 197 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 TMEM155Q4W5P6 130 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 OR52W1Q6IF63 320 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 Q6ZPA2 131 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 MOB1BQ7L9L4 216 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 TMEM229BQ8NBD8 167 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 BEST4Q8NFU0 473 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 OR4K15Q8NH41 348 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 PERPQ96FX8 193 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 COX4I2Q96KJ9 171 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 GSX2Q9BZM3 304 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 CENPEQ02224 2701 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 CEACAM18A8MTB9 384 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 ZNF736B4DX44 427 aaPredicted RBP12.2□□□□□ -0.46
VRK3-212ENST00000596814 MT-ND4P03905 459 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 HLA-DMAP28067 261 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 ASAH1Q13510 395 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 GDPD3Q7L5L3 318 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 SPICQ8N5J4 248 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 POC5Q8NA72 575 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 ZNF286AQ9HBT8 521 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 Q9N2K0 584 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 CTSZQ9UBR2 303 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 SLC25A10Q9UBX3 287 aaPredicted RBP12.2□□□□□ -0.46
VRK3-212ENST00000596814 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 ARID1AO14497 2285 aa12.2□□□□□ -0.46
VRK3-212ENST00000596814 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms