RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 JAGN1Q8N5M9 183 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 NKAIN3Q8N8D7 197 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 UFD1Q92890 307 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 PPIL3Q9H2H8 161 aaKnown RBP17.12■□□□□ 0.33
PNKP-209ENST00000596726 C1RLQ9NZP8 487 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 ZNF581Q9P0T4 197 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 BLOC1S6Q9UL45 172 aa17.12■□□□□ 0.33
PNKP-209ENST00000596726 MRPS28Q9Y2Q9 187 aaKnown RBP17.12■□□□□ 0.33
PNKP-209ENST00000596726 MAP2K4P45985 399 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 KCNJ3P48549 501 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 LGALS4P56470 323 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 MLLT11Q13015 90 aaPredicted RBP17.11■□□□□ 0.33
PNKP-209ENST00000596726 MPV17LQ2QL34 196 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 SLC22A6Q4U2R8 563 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 GLIPR1L1Q6UWM5 242 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 LRRTM1Q86UE6 522 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 C3orf56Q8N813 242 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 OR4D6Q8NGJ1 314 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 OR5R1Q8NH85 324 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 UQCC2Q9BRT2 126 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 TMEM133Q9H2Q1 129 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 GAL3ST2Q9H3Q3 398 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 VPREB3Q9UKI3 123 aa17.11■□□□□ 0.33
PNKP-209ENST00000596726 TBL2Q9Y4P3 447 aaKnown RBP17.11■□□□□ 0.33
PNKP-209ENST00000596726 HSPB6O14558 160 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 GEMIN2O14893 280 aaKnown RBP17.1■□□□□ 0.33
PNKP-209ENST00000596726 DENRO43583 198 aaKnown RBP17.1■□□□□ 0.33
PNKP-209ENST00000596726 NDUFA7O95182 113 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 ARG1P05089 322 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 CRYBA1P05813 215 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 UCHL1P09936 223 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 CGB3P0DN86 165 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 CGB7P0DN87 165 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 GTF2F2P13984 249 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 CPEP16870 476 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 RELBQ01201 579 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 AANATQ16613 207 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 LDLRAD2Q5SZI1 272 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 RSBN1Q5VWQ0 802 aaPredicted RBP17.1■□□□□ 0.33
PNKP-209ENST00000596726 HEPN1Q6WQI6 88 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 CEACAM19Q7Z692 300 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 LHFPL4Q7Z7J7 247 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 PHYHIPQ92561 330 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 MRPS24Q96EL2 167 aaKnown RBP17.1■□□□□ 0.33
PNKP-209ENST00000596726 OR6C3Q9NZP0 311 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 MMP24Q9Y5R2 645 aa17.1■□□□□ 0.33
PNKP-209ENST00000596726 IGHV2-26A0A0B4J1V2 119 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 ZNF729A6NN14 1252 aaPredicted RBP17.09■□□□□ 0.33
PNKP-209ENST00000596726 OR7C1O76099 320 aaPredicted RBP17.09■□□□□ 0.33
PNKP-209ENST00000596726 HSMCR30P0CW71 290 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 CD37P11049 281 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 PAX6P26367 422 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 TBCEQ15813 527 aaPredicted RBP17.09■□□□□ 0.33
PNKP-209ENST00000596726 C17orf58Q2M2W7 97 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 AWAT2Q6E213 333 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 TMEM91Q6ZNR0 172 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 GDPGP1Q6ZNW5 385 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 DYNAPQ8N1N2 210 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 SUMF2Q8NBJ7 301 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 PLPPR1Q8TBJ4 325 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 MGLLQ99685 303 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 SSX3Q99909 188 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 DPCDQ9BVM2 203 aaPredicted RBP17.09■□□□□ 0.33
PNKP-209ENST00000596726 CLEC7AQ9BXN2 247 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 BARHL1Q9BZE3 327 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 TCF7L1Q9HCS4 588 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 ING3Q9NXR8 418 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 KIF25Q9UIL4 384 aa17.09■□□□□ 0.33
PNKP-209ENST00000596726 BTBD17A6NE02 478 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 SRMP19623 302 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 MDKP21741 143 aaPredicted RBP17.08■□□□□ 0.32
PNKP-209ENST00000596726 OMGP23515 440 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 CDK2P24941 298 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 GDNFP39905 211 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 GABARAPL2P60520 117 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 RPS25P62851 125 aaKnown RBP17.08■□□□□ 0.32
PNKP-209ENST00000596726 TRAM1Q15629 374 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 LRRC75BQ2VPJ9 315 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 HSD17B12Q53GQ0 312 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 PRAMEF5Q5TYX0 476 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 OR52W1Q6IF63 320 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 BAIAP2L2Q6UXY1 529 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 TMEM203Q969S6 136 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 MALSU1Q96EH3 234 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 ZNF747Q9BV97 191 aa17.08■□□□□ 0.32
PNKP-209ENST00000596726 RRP15Q9Y3B9 282 aaKnown RBP17.08■□□□□ 0.32
PNKP-209ENST00000596726 MEIKINA0A087WXM9 373 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 POM121CA8CG34 1229 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 H3BUX3 64 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 MRPS14O60783 128 aaKnown RBP17.07■□□□□ 0.32
PNKP-209ENST00000596726 CD34P28906 385 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 RAG2P55895 527 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 C1orf100Q5SVJ3 147 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 SLC35E4Q6ICL7 350 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 OR13A1Q8NGR1 328 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 OR4F5Q8NH21 305 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 PIFOQ8TCI5 191 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 FOXRED1Q96CU9 486 aaPredicted RBP17.07■□□□□ 0.32
PNKP-209ENST00000596726 Q9H521 79 aa17.07■□□□□ 0.32
PNKP-209ENST00000596726 LINC00574Q9H8X3 128 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms