RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TRAV24A0A0B4J272 114 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
CCDC9-202ENST00000595659 LY6LH3BQJ8 138 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 GABRPO00591 440 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 MPZL2O60487 215 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 AMY1AP04745 511 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 AMY2AP04746 511 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 RAB3AP20336 220 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 MTNR1BP49286 362 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 PRRX1P54821 245 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 CD83Q01151 205 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 RAB40BQ12829 278 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 PIGYQ3MUY2 71 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 XAF1Q6GPH4 301 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 OR51T1Q8NGJ9 327 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 RFESDQ8TAC1 157 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 APH1BQ8WW43 257 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 KIRREL1Q96J84 757 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 AKR1E2Q96JD6 320 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
CCDC9-202ENST00000595659 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
CCDC9-202ENST00000595659 LIN7BQ9HAP6 207 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 S100A14Q9HCY8 104 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 FAM118AQ9NWS6 357 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
CCDC9-202ENST00000595659 RPL36Q9Y3U8 105 aaKnown RBP13.59□□□□□ -0.23
CCDC9-202ENST00000595659 TCRBV4S1A1TA0A5B7 111 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 ALX3O95076 343 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 HTR3BO95264 441 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
CCDC9-202ENST00000595659 LIMS3P0CW19 117 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 LIMS4P0CW20 117 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 IGLL1P15814 213 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 CEACAM3P40198 252 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 ARHGDIBP52566 201 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 RSU1Q15404 277 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 CNIH3Q8TBE1 160 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 MRGPRDQ8TDS7 321 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 PHF21AQ96BD5 680 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 INPP5EQ9NRR6 644 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 CALYQ9NYX4 217 aa13.58□□□□□ -0.24
CCDC9-202ENST00000595659 A0A087X0M5 115 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 A0A1B0GX30 115 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 MAGEB3O15480 346 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 OR2F2O95006 317 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 CDRT1O95170 752 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 BAG2O95816 211 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 CGB3P0DN86 165 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 CGB7P0DN87 165 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 PF4V1P10720 104 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 CD33P20138 364 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 ETV1P50549 477 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 MRPL28Q13084 256 aaKnown RBP13.57□□□□□ -0.24
CCDC9-202ENST00000595659 ELP2Q6IA86 826 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 PXT1Q8NFP0 134 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 OR9G1Q8NH87 305 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 PLPPR1Q8TBJ4 325 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 MRAPQ8TCY5 172 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 RPEQ96AT9 228 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 JAM3Q9BX67 310 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 BARHL1Q9BZE3 327 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 MRPS18AQ9NVS2 196 aaKnown RBP13.57□□□□□ -0.24
CCDC9-202ENST00000595659 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
CCDC9-202ENST00000595659 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
CCDC9-202ENST00000595659 A0A1W2PPE3 182 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 MNDAP41218 407 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 GNG10P50151 68 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 DIAPH2-AS1Q14236 149 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 HNF4GQ14541 408 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 KLHL22Q53GT1 634 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 OR2G6Q5TZ20 316 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 CCDC144NLQ6NUI1 221 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 ZNF529Q6P280 563 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 OR56B4Q8NH76 319 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 MYDGFQ969H8 173 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 TOMM40LQ969M1 308 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 NECAP2Q9NVZ3 263 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 AURKAIP1Q9NWT8 199 aaPredicted RBP13.56□□□□□ -0.24
CCDC9-202ENST00000595659 ING4Q9UNL4 249 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 PSG11Q9UQ72 335 aa13.56□□□□□ -0.24
CCDC9-202ENST00000595659 J3QR06 171 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 PIN1P1O15428 100 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 WBP4O75554 376 aaKnown RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 CLIC3O95833 236 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 SNRNP70P08621 437 aaKnown RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 FAM106CPP0CH98 169 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 C21orf33P30042 268 aaPredicted RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 SSTR5P35346 364 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 IL13RA2Q14627 380 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 RSBN1Q5VWQ0 802 aaPredicted RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 REC114Q7Z4M0 266 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms