RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 GLIPR1P48060 266 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 RPS11P62280 158 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 ATXN7L3Q14CW9 347 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 MPV17LQ2QL34 196 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 OSR2Q8N2R0 312 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 ZFP41Q8N8Y5 198 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 ZNF565Q8N9K5 539 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 COQ2Q96H96 371 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 NR1H4Q96RI1 486 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 ZNF184Q99676 751 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 CITED1Q99966 193 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 FBLN5Q9UBX5 448 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 PKD1L1Q8TDX9 2849 aa14.37□□□□□ -0.11
SHKBP1-204ENST00000594862 TRBV5-7A0A0A0MS05 114 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 MEX3AA1L020 520 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 CDK1P06493 297 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 CDK2P24941 298 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 HTR1DP28221 377 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 GABRA5P31644 462 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 CEACAM3P40198 252 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 HSPA13P48723 471 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 RBM11P57052 281 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 PROK1P58294 105 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 DOC2BQ14184 412 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 FAM189A2Q15884 450 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 SSX2Q16385 188 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 C6orf141Q5SZD1 244 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 MS4A15Q8N5U1 240 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 OR13C5Q8NGS8 318 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 NDNFQ8TB73 568 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 MRPS24Q96EL2 167 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 OR14A2Q96R54 314 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 SPACA1Q9HBV2 294 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 NKX1-2Q9UD57 310 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 ING4Q9UNL4 249 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 TCF19Q9Y242 345 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 TPRKBQ9Y3C4 175 aa14.36□□□□□ -0.11
SHKBP1-204ENST00000594862 M0QZ24 198 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 GTF2F2P13984 249 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 CD34P28906 385 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 AQP4P55087 323 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 LY6EQ16553 131 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 PRAMEF5Q5TYX0 476 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 ABHD12Q8N2K0 398 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 OR10K1Q8NGX5 313 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 OR2T6Q8NHC8 308 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 DERL3Q96Q80 235 aa14.35□□□□□ -0.11
SHKBP1-204ENST00000594862 MEGF8Q7Z7M0 2845 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 MEIKINA0A087WXM9 373 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 A0A087X0M5 115 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 TRAV24A0A0B4J272 114 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 KBTBD11-OT1A0A1B0GTJ5 212 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 A0A1B0GX30 115 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 MEGF11A6BM72 1044 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 F2RL2O00254 374 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 TOR1AO14656 332 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 OR7C1O76099 320 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 CDRT1O95170 752 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 SERPINA2P20848 420 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 GLP1RP43220 463 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 KIR2DS4P43632 304 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 PRRX1P54821 245 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 PIGYQ3MUY2 71 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 JAGN1Q8N5M9 183 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 OR10A7Q8NGE5 316 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 DPCDQ9BVM2 203 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 ANKRD60Q9BZ19 345 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 DPM3Q9P2X0 92 aa14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 MRPS28Q9Y2Q9 187 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-204ENST00000594862 TRAV8-7A0A075B6U6 113 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 PNMA8CA0A1B0GUJ8 204 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 LEUTXA8MZ59 168 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 H0YHG0 523 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 HSPB6O14558 160 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 MYF6P23409 242 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 BRS3P32247 399 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 GPR50Q13585 617 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 SPHARQ15513 63 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 SLC22A6Q4U2R8 563 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 OR4P4Q8NGL7 312 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 PIFOQ8TCI5 191 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 NRG4Q8WWG1 115 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 UQCC2Q9BRT2 126 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 PPIL3Q9H2H8 161 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 KIF25Q9UIL4 384 aa14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 AMMECR1Q9Y4X0 333 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-204ENST00000594862 TMEM30CPA0ZSE6 113 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 OOSP1A8MZH6 123 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 PTGES3LE9PB15 166 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 IL1AP01583 271 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 IGLV1-47P01700 117 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 SLC35A2P78381 396 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 RBM39Q14498 530 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 RSBN1Q5VWQ0 802 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
SHKBP1-204ENST00000594862 CCDC144NLQ6NUI1 221 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms