RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
VRK3-206ENST00000594090 FBP1P09467 338 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 KCNJ3P48549 501 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 ZNF773Q6PK81 442 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 SUMF2Q8NBJ7 301 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 CORO2AQ92828 525 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 SLC25A28Q96A46 364 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 FOXRED1Q96CU9 486 aaPredicted RBP11.87□□□□□ -0.51
VRK3-206ENST00000594090 MRPS24Q96EL2 167 aaKnown RBP11.87□□□□□ -0.51
VRK3-206ENST00000594090 ING3Q9NXR8 418 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 FAM96BQ9Y3D0 163 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 LRRC42Q9Y546 428 aa11.87□□□□□ -0.51
VRK3-206ENST00000594090 ACTG1P63261 375 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 PAX5Q02548 391 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 TAF9Q16594 264 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 MIDNQ504T8 468 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 C1orf100Q5SVJ3 147 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 TMEM104Q8NE00 496 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
VRK3-206ENST00000594090 GAL3ST2Q9H3Q3 398 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 BANF2Q9H503 90 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 GHRLQ9UBU3 117 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 POMT1Q9Y6A1 747 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 CCRL2O00421 344 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 CRTAPO75718 401 aaPredicted RBP11.86□□□□□ -0.51
VRK3-206ENST00000594090 PAHP00439 452 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 UBBP0CG47 229 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 CD37P11049 281 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 MGMTP16455 207 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 CALRP27797 417 aaKnown RBP11.86□□□□□ -0.51
VRK3-206ENST00000594090 PSMB9P28065 219 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 RSBN1Q5VWQ0 802 aaPredicted RBP11.86□□□□□ -0.51
VRK3-206ENST00000594090 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 OR13D1Q8NGV5 346 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 SSMEM1Q8WWF3 244 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 Q96M66 194 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 GFI1Q99684 422 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 SELENOIQ9C0D9 397 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 TNFRSF19Q9NS68 423 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 KIF25Q9UIL4 384 aa11.86□□□□□ -0.51
VRK3-206ENST00000594090 SLC22A1O15245 554 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 MMP23AO75900 390 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 GLP1RP43220 463 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 ATAD3CQ5T2N8 411 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 PRAMEF5Q5TYX0 476 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 HEPN1Q6WQI6 88 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 BARHL1Q9BZE3 327 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 CST11Q9H112 138 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
VRK3-206ENST00000594090 RCC2Q9P258 522 aaKnown RBP11.85□□□□□ -0.51
VRK3-206ENST00000594090 AK6Q9Y3D8 172 aaKnown RBP11.85□□□□□ -0.51
VRK3-206ENST00000594090 DNHD1Q96M86 4753 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 MEIKINA0A087WXM9 373 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A10PA6NDY2 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A18PA6NE21 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A7PA6NKC0 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 ZNF729A6NN14 1252 aaPredicted RBP11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A23PA8MXZ1 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 ODF3BA8MYP8 253 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 ARG1P05089 322 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 CDK2P24941 298 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 HTR2CP28335 458 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 IER3P46695 156 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 C17orf58Q2M2W7 97 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 ZNF626Q68DY1 528 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 SLC35E4Q6ICL7 350 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 OR6M1Q8NGM8 313 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 CHIAQ9BZP6 476 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 TMEM133Q9H2Q1 129 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 SPACA1Q9HBV2 294 aa11.84□□□□□ -0.51
VRK3-206ENST00000594090 IGHV2-26A0A0B4J1V2 119 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 TRDV1A0A1B0GX56 115 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms