RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ADGRG7Q96K78 797 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 ABHD14AQ9BUJ0 271 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 ZNF391Q9UJN7 358 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 DMRT1Q9Y5R6 373 aa14.2□□□□□ -0.14
LIG1-206ENST00000594067 LRRC3CA6NJW4 275 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 PCBD1P61457 104 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 PYY3Q5JQD4 70 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 OR2B11Q5JQS5 317 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 ABLIM2Q6H8Q1 611 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 SLC7A10Q9NS82 523 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 PARPBPQ9NWS1 579 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 ZNF727A8MUV8 499 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 NTN3O00634 580 aaPredicted RBP14.19□□□□□ -0.14
LIG1-206ENST00000594067 RD3LP0DJH9 198 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 CCNOP22674 350 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 HIKESHIQ53FT3 197 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 SPIN3Q5JUX0 258 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 C9orf135Q5VTT2 229 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 SPSB3Q6PJ21 355 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 BOD1Q96IK1 185 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 DEPPQ9NTK1 212 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 MMP24Q9Y5R2 645 aa14.19□□□□□ -0.14
LIG1-206ENST00000594067 RBFOX3A6NFN3 312 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 ZNF729A6NN14 1252 aaPredicted RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 YKT6O15498 198 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 GNRHRP30968 328 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 CDX1P47902 265 aaPredicted RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 ZFP36L1Q07352 338 aaKnown RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 MAFAQ8NHW3 353 aaPredicted RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 EXTL1Q92935 676 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 HLA-CQ95604 372 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 HS3ST6Q96QI5 342 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 C11orf1Q9H5F2 150 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 CRIM1Q9NZV1 1036 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 UBE2J1Q9Y385 318 aaPredicted RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 NCKAP5O14513 1909 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 TRDCB7Z8K6 153 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 WRBO00258 174 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 MMP7P09237 267 aaPredicted RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 BCL3P20749 454 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 OMGP23515 440 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 DPPA2Q7Z7J5 298 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 TBC1D26Q86UD7 250 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 OR2C3Q8N628 320 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 SLAMF9Q96A28 289 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 MAGT1Q9H0U3 335 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 PINLYPA6NC86 204 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 H3BQ15 152 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 HSPB6O14558 160 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 CCL2P13500 99 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 ATP6V0CP27449 155 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 GDF1P27539 372 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 HAGHQ16775 308 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 PPP1R32Q7Z5V6 425 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 OR2G3Q8NGZ4 309 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 TMEM222Q9H0R3 208 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 DOK5Q9P104 306 aa14.18□□□□□ -0.14
LIG1-206ENST00000594067 NOSIPQ9Y314 301 aaKnown RBP14.18□□□□□ -0.14
LIG1-206ENST00000594067 CDRT15L2A8MXV6 281 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 RPL36A-HNRNPH2H7BZ11 118 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 NKX2-1P43699 371 aaPredicted RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 RND3P61587 244 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 RIPPLY2Q5TAB7 128 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 OR56B2PQ8NGI1 322 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 RAB39BQ96DA2 213 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 C1QTNF5Q9BXJ0 243 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 FGF23Q9GZV9 251 aaPredicted RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 IL36RNQ9UBH0 155 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 A0A096LPE4 126 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 A0A1W2PPZ6 126 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 SLC33A1O00400 549 aaPredicted RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 HSD17B6O14756 317 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 NDUFS6O75380 124 aaKnown RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 SCTP09683 121 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 ITGA3P26006 1051 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 NDUFA6P56556 154 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 ZFP62Q8NB50 900 aaPredicted RBP14.17□□□□□ -0.14
LIG1-206ENST00000594067 TREM2Q9NZC2 230 aa14.17□□□□□ -0.14
LIG1-206ENST00000594067 SSSCA1O60232 199 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 NXPH3O95157 252 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 SLC34A2O95436 690 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 ELOBQ15370 118 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 CXorf66Q5JRM2 361 aaPredicted RBP14.16□□□□□ -0.14
LIG1-206ENST00000594067 C9orf152Q5JTZ5 239 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 SP5Q6BEB4 398 aaPredicted RBP14.16□□□□□ -0.14
LIG1-206ENST00000594067 CDPF1Q6NVV7 123 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 ZNF343Q6P1L6 599 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 ZNF818PQ6ZRF7 136 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 SPSB4Q96A44 273 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 CCDC163A0A0D9SF12 145 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 ZNF724A8MTY0 619 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 ADAM20O43506 726 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 CYTIPO60759 359 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 SRP19P09132 144 aaKnown RBP14.16□□□□□ -0.14
LIG1-206ENST00000594067 CXCL1P09341 107 aa14.16□□□□□ -0.14
LIG1-206ENST00000594067 TAGLN2P37802 199 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms