RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ARPC5O15511 151 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 NDUFA2O43678 99 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 NRASP01111 189 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 CLDN12P56749 244 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 H2BFSP57053 126 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 CEACAM21Q3KPI0 293 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 CLVS2Q5SYC1 327 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 TMEM42Q69YG0 159 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 ZNF660Q6AZW8 331 aaPredicted RBP16.46■□□□□ 0.23
LSM4-203ENST00000593829 CYB5R2Q6BCY4 276 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 MOB3CQ70IA8 216 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 WDR86Q86TI4 376 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 HPSE2Q8WWQ2 592 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 ARL6Q9H0F7 186 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 RNF7Q9UBF6 113 aa16.46■□□□□ 0.23
LSM4-203ENST00000593829 TMEM210A6NLX4 147 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 CD5LO43866 347 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 ZNF154Q13106 437 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 ZMYND11Q15326 602 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 PLCXD3Q63HM9 321 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 ALKAL2Q6UX46 152 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 ZNF676Q8N7Q3 588 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 OR5AK2Q8NH90 309 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 WDR89Q96FK6 387 aaPredicted RBP16.45■□□□□ 0.22
LSM4-203ENST00000593829 GAL3ST1Q99999 423 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 MDH2P40926 338 aaKnown RBP16.45■□□□□ 0.22
LSM4-203ENST00000593829 LMO4P61968 165 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 FAM76BQ5HYJ3 339 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 FAAP20Q6NZ36 180 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 Q71RC1 249 aaPredicted RBP16.45■□□□□ 0.22
LSM4-203ENST00000593829 OR5A2Q8NGI9 324 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 OR4C16Q8NGL9 310 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 GINS4Q9BRT9 223 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 STEAP1Q9UHE8 339 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 HHLA2Q9UM44 414 aa16.45■□□□□ 0.22
LSM4-203ENST00000593829 PPIAL4EA0A075B759 164 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 TMEM212A6NML5 194 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 PPIAL4DF5H284 164 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 PPIAL4FP0DN26 164 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 GPM6AP51674 278 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 GNG3P63215 75 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 TMEM155Q4W5P6 130 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 ZNF826PQ6ZT77 177 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 C11orf53Q8IXP5 236 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 MUC20Q8N307 709 aaPredicted RBP16.44■□□□□ 0.22
LSM4-203ENST00000593829 OR10Z1Q8NGY1 313 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 C10orf35Q96D05 121 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 RAB39BQ96DA2 213 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 FGF23Q9GZV9 251 aaPredicted RBP16.44■□□□□ 0.22
LSM4-203ENST00000593829 TLNRD1Q9H1K6 362 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 ZNF665Q9H7R5 613 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 GPR173Q9NS66 373 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 PPIAL4AQ9Y536 164 aa16.44■□□□□ 0.22
LSM4-203ENST00000593829 OR5B21A6NL26 309 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 RFPL4AA6NLU0 287 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 ZNF732B4DXR9 585 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 RFPL4AL1F8VTS6 287 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 ZNF205O95201 554 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 FSTL3O95633 263 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 UBBP0CG47 229 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 AKAIN1P0CW23 69 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 RPS27AP62979 156 aaKnown RBP16.43■□□□□ 0.22
LSM4-203ENST00000593829 UBA52P62987 128 aaKnown RBP16.43■□□□□ 0.22
LSM4-203ENST00000593829 STPG2Q8N412 459 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 OR52B4Q8NGK2 314 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 MSI2Q96DH6 328 aaKnown RBP16.43■□□□□ 0.22
LSM4-203ENST00000593829 C1orf159Q96HA4 380 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 COMMD4Q9H0A8 199 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 H3BUI4 141 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 CDIPTO14735 213 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 LMX1BO60663 402 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 IGHV2-5P01817 119 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 SRSF4Q08170 494 aaKnown RBP16.43■□□□□ 0.22
LSM4-203ENST00000593829 DMRTC1Q5HYR2 192 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 FAM201AQ5SY85 155 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 PCDHB10Q9UN67 800 aa16.43■□□□□ 0.22
LSM4-203ENST00000593829 YLPM1P49750 1951 aaKnown RBP16.42■□□□□ 0.22
LSM4-203ENST00000593829 CSPG4Q6UVK1 2322 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 FXYD6-FXYD2A0A087WZ82 144 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 MPTX1A8MV57 137 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 MGMTP16455 207 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 C2orf68Q2NKX9 166 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 WDR82Q6UXN9 313 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 LINC01356Q8N9X3 169 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 SCCPDHQ8NBX0 429 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 MRPS24Q96EL2 167 aaKnown RBP16.42■□□□□ 0.22
LSM4-203ENST00000593829 FXYD6Q9H0Q3 95 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 IFT46Q9NQC8 304 aa16.42■□□□□ 0.22
LSM4-203ENST00000593829 SULT1C2O00338 296 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 GOSR2O14653 212 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 PTHLHP12272 177 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 ZNF16P17020 682 aaPredicted RBP16.41■□□□□ 0.22
LSM4-203ENST00000593829 BOLLQ8N9W6 283 aaKnown RBP16.41■□□□□ 0.22
LSM4-203ENST00000593829 OR5T2Q8NGG2 359 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 OR51A4Q8NGJ6 313 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 OR13C3Q8NGS6 347 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 OR10AC1Q8NH08 325 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 CCDC107Q8WV48 283 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 PP6455Q8WZ26 134 aa16.41■□□□□ 0.22
LSM4-203ENST00000593829 CHST5Q9GZS9 411 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms