RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 OR13A1Q8NGR1 328 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 OR13C3Q8NGS6 347 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 RFKQ969G6 155 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 WWC2-AS2Q96NR7 200 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 GPR61Q9BZJ8 451 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 LINC00527Q9UJ94 153 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 J3QR06 171 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 J3QRE1 110 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 DEGS1O15121 323 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 HTR1AP08908 422 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 TMEM11P17152 192 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 SAXO1Q8IYX7 474 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 HRASLS5Q96KN8 279 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 P2RX4Q99571 388 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 RHOFQ9HBH0 211 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 CALYQ9NYX4 217 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 OR6C3Q9NZP0 311 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 KIF25Q9UIL4 384 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 MYRFQ9Y2G1 1151 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 AP4S1Q9Y587 144 aa12.92□□□□□ -0.34
LIG1-205ENST00000593425 DAPL1A0PJW8 107 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 OR4C45A6NMZ5 311 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 NUDT19A8MXV4 375 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 H0YJX3 145 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 SLC16A6O15403 523 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 CCR9P51686 369 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 BNIP1Q12981 228 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 HES1Q14469 280 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 HNF4GQ14541 408 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 CHPT1Q8WUD6 406 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 RNFT2Q96EX2 444 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 PELI1Q96FA3 418 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 ZCCHC4Q9H5U6 513 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 IDI2-AS1Q9NZ38 188 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 OAZ3Q9UMX2 235 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
LIG1-205ENST00000593425 AMMECR1Q9Y4X0 333 aaPredicted RBP12.91□□□□□ -0.34
LIG1-205ENST00000593425 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 TRAV24A0A0B4J272 114 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 SERPINE3A8MV23 424 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 IL1AP01583 271 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 IGKV1D-33P01593 117 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 IGKV1-33P01594 117 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 HCKP08631 526 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 MYCNOSP40205 109 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 MTNR1BP49286 362 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 GNG10P50151 68 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 ALKBH1Q13686 389 aaKnown RBP12.9□□□□□ -0.34
LIG1-205ENST00000593425 LTC4SQ16873 150 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 PAN3Q58A45 887 aaKnown RBP12.9□□□□□ -0.34
LIG1-205ENST00000593425 KCTD20Q7Z5Y7 419 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 C4orf36Q96KX1 117 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
LIG1-205ENST00000593425 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 ZFP57Q9NU63 452 aa12.9□□□□□ -0.34
LIG1-205ENST00000593425 SAC3D1A6NKF1 404 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 LINC01548A6NM66 108 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 NPIPB11E5RHQ5 1161 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 H0YHG0 523 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 J3QLW9 94 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 FGF16O43320 207 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 ZNF19P17023 458 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 KISS1Q15726 138 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 LPCAT4Q643R3 524 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 RFESDQ8TAC1 157 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
LIG1-205ENST00000593425 LINC00574Q9H8X3 128 aa12.89□□□□□ -0.35
LIG1-205ENST00000593425 TRAV39A0A0B4J263 110 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 SULT1B1O43704 296 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 IGHG2P01859 326 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 DBTP11182 482 aaKnown RBP12.88□□□□□ -0.35
LIG1-205ENST00000593425 FCGR1AP12314 374 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 SLC6A1P30531 599 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 SSTR5P35346 364 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 RAB7AP51149 207 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 ZNF691Q5VV52 312 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 RSBN1Q5VWQ0 802 aaPredicted RBP12.88□□□□□ -0.35
LIG1-205ENST00000593425 ELP2Q6IA86 826 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 OR8H3Q8N146 312 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 STPG2Q8N412 459 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 ZNF565Q8N9K5 539 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 CNIH3Q8TBE1 160 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 TFAP2CQ92754 450 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 AASSQ9UDR5 926 aa12.88□□□□□ -0.35
LIG1-205ENST00000593425 GABRPO00591 440 aa12.87□□□□□ -0.35
LIG1-205ENST00000593425 C21orf33P30042 268 aaPredicted RBP12.87□□□□□ -0.35
LIG1-205ENST00000593425 SLC35B1P78383 322 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms