RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CRYGNQ8WXF5 182 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 NDRG1Q92597 394 aaKnown RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 RAB3CQ96E17 227 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 OR8B4Q96RC9 309 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 KCTD14Q9BQ13 255 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 PDCD1LG2Q9BQ51 273 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ZBP1Q9H171 429 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 AMBNQ9NP70 447 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 VPS29Q9UBQ0 182 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 FAM32AQ9Y421 112 aaKnown RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 NIPBLQ6KC79 2804 aaeCLIP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 MYH3P11055 1940 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CELSR2Q9HCU4 2923 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 A0A1B0GW55 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 RFPL4AA6NLU0 287 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 PPP5D1E7EU14 171 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 RFPL4AL1F8VTS6 287 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 F8W036 122 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 C15orf65H3BRN8 121 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 KPNA4O00629 521 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CDX4O14627 284 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ARPC5O15511 151 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SLC22A5O76082 557 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CNIH1O95406 144 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 HAND1O96004 215 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 HOXB7P09629 217 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L2P0CJ85 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L3P0CJ86 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L4P0CJ87 422 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L5P0CJ88 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L6P0CJ89 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L7P0CJ90 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 C1GALT1C1LP0DN25 315 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 LIPCP11150 499 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 IFI30P13284 250 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 AKR1C4P17516 323 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 KLK2P20151 261 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ELK4P28324 431 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 BTDP43251 543 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 KIR2DS4P43632 304 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 RAB7AP51149 207 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 PAFAH1B2P68402 229 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SEMG2Q02383 582 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OR2F1Q13607 317 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 APOFQ13790 326 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 EDDM3AQ14507 147 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 GINS1Q14691 196 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TRIP13Q15645 432 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CD226Q15762 336 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 C17orf58Q2M2W7 97 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM97Q5BJF2 176 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 LINC00242Q5T6M2 205 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ELP2Q6IA86 826 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OR52E8Q6IFG1 317 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 RPL13AP3Q6NVV1 102 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4L9Q6RFH8 374 aaPredicted RBP3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SMARCD3Q6STE5 483 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 APOOLQ6UXV4 268 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM135Q86UB9 458 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 C11orf53Q8IXP5 236 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 BLIDQ8IZY5 108 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF491Q8N8L2 437 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OR8G5Q8NG78 346 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OR8U1Q8NH10 309 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 FLVCR1-AS1Q8TAF5 88 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 LHFPL5Q8TAF8 219 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 EEF1AKMT1Q8WVE0 214 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 C11orf40Q8WZ69 217 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CLDN23Q96B33 292 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 RCN3Q96D15 328 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SEC22AQ96IW7 307 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 BTF3L4Q96K17 158 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OR10C1Q96KK4 312 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF488Q96MN9 340 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM56Q96MV1 263 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF681Q96N22 645 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 OXGR1Q96P68 337 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ZIM3Q96PE6 472 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TBX15Q96SF7 602 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SORT1Q99523 831 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 FOXC2Q99958 501 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TXNIPQ9H3M7 391 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CWH43Q9H720 699 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TIGARQ9NQ88 270 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 BIN3Q9NQY0 253 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 FAM206AQ9NX38 181 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DUX4Q9UBX2 424 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF225Q9UK10 706 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SLC7A11Q9UPY5 501 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 TP53TG1Q9Y2A0 90 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 HSPB11Q9Y547 144 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 SLC22A7Q9Y694 548 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ADGRG4Q8IZF6 3080 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 MIA3Q5JRA6 1907 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 ADAMTS9Q9P2N4 1935 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 DOCK8Q8NF50 2099 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
SMAD4-216ENST00000593223 MCM3APO60318 1980 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms