RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 FAM131CQ96AQ9 280 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 Q96M66 194 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 TMEM204Q9BSN7 226 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 ADAT1Q9BUB4 502 aaKnown RBP3.1□□□□□ -1.91
VMP1-216ENST00000592790 GGACTQ9BVM4 153 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 ZNF586Q9NXT0 402 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 OR14J1Q9UGF5 321 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 ANAPC10Q9UM13 185 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 TP53TG5Q9Y2B4 290 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 LIPGQ9Y5X9 500 aa3.1□□□□□ -1.91
VMP1-216ENST00000592790 A0A1W2PQF6 199 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 XKRY2A2RUG3 117 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 FAM24AA6NFZ4 105 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 ZNF732B4DXR9 585 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SH2D1BO14796 132 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 PHOX2AO14813 284 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 NPIPB7O75200 414 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 ZNF737O75373 536 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR2J2O76002 312 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 EN2P19622 333 aaPredicted RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 ACKR3P25106 362 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 PTGER4P35408 488 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 DYNLT3P51808 116 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR1D5P58170 312 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 FHL1Q13642 323 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SRSF7Q16629 238 aaKnown RBP eCLIP3.09□□□□□ -1.91
VMP1-216ENST00000592790 TMEM183BQ1AE95 376 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 GAB4Q2WGN9 574 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 PLPPR5Q32ZL2 321 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 TM4SF20Q53R12 229 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SLC25A53Q5H9E4 307 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 NCMAPQ5T1S8 102 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 FAM27BQ5VT28 67 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 C1QL3Q5VWW1 255 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 WDR73Q6P4I2 378 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 PET117Q6UWS5 81 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 LCN15Q6UWW0 184 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 ZNF66Q6ZN08 573 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 APCDD1LQ8NCL9 501 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 AGBL5Q8NDL9 886 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR2T10Q8NGZ9 312 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR5R1Q8NH85 324 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR1L3Q8NH93 324 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR2V1Q8NHB1 315 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 NEIL1Q96FI4 390 aaPredicted RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 RTBDNQ9BSG5 229 aaPredicted RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 TMEM147Q9BVK8 224 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 MS4A5Q9H3V2 200 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 MPC1Q9Y5U8 109 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 PTPN13Q12923 2485 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 MYOFQ9NZM1 2061 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 COL4A6Q14031 1691 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 IGHV1OR21-1A0A087WYE8 117 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 CTXND1A0A1B0GTU2 59 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 A0A1W2PNR3 127 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 HSBP1L1C9JCN9 74 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SYNGR2O43760 224 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 ACAA1P09110 424 aaPredicted RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 MST1P26927 711 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 DDTP30046 118 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 RTL8BQ17RB0 113 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SP6Q3SY56 376 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SLC25A26Q70HW3 274 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 LYZL2Q7Z4W2 148 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 TBC1D26Q86UD7 250 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 BAGE3Q86Y29 109 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 BAGE2Q86Y30 109 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 CISD2Q8N5K1 135 aaKnown RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR4F5Q8NH21 305 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 IL1F10Q8WWZ1 152 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 BORCS7Q96B45 105 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR4F4Q96R69 305 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 OR6C1Q96RD1 312 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 RSRP1Q9BUV0 290 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 RSPO3Q9BXY4 272 aaPredicted RBP3.09□□□□□ -1.91
VMP1-216ENST00000592790 PRSS50Q9UI38 385 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 TIMM9Q9Y5J7 89 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 SCN3AQ9NY46 2000 aa3.09□□□□□ -1.91
VMP1-216ENST00000592790 HEATR5BQ9P2D3 2071 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 IGKV3D-11A0A0A0MRZ8 115 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CLEC18AA5D8T8 446 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OTOL1A6NHN0 477 aaPredicted RBP3.09□□□□□ -1.92
VMP1-216ENST00000592790 TMEM250H0YL14 139 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 SPINT2O43291 252 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CST7O76096 145 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR8U8P0C7N1 319 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 FAM157CP0CG43 387 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 GDF1P27539 372 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 OR10J1P30954 320 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 CDAP32320 146 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 TMEM50BP56557 158 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 RBM11P57052 281 aaKnown RBP3.09□□□□□ -1.92
VMP1-216ENST00000592790 RAC3P60763 192 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 GNG3P63215 75 aa3.09□□□□□ -1.92
VMP1-216ENST00000592790 PAFAH1B2P68402 229 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms