RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 SVBPQ8N300 66 aa14.17□□□□□ -0.14
PRKCSH-217ENST00000592741 UBAC2Q8NBM4 344 aa14.17□□□□□ -0.14
PRKCSH-217ENST00000592741 GMPPAQ96IJ6 420 aaPredicted RBP14.17□□□□□ -0.14
PRKCSH-217ENST00000592741 TREM1Q9NP99 234 aa14.17□□□□□ -0.14
PRKCSH-217ENST00000592741 UBE2J1Q9Y385 318 aaPredicted RBP14.17□□□□□ -0.14
PRKCSH-217ENST00000592741 DNAJC13O75165 2243 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 DNASE2O00115 360 aaPredicted RBP14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 FBXO24O75426 580 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 SLC34A2O95436 690 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 TMPRSS7Q7RTY8 843 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 FAM58AQ8N1B3 248 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 ERGIC1Q969X5 290 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 ZNF488Q96MN9 340 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 RCL1Q9Y2P8 373 aaKnown RBP14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 POMT1Q9Y6A1 747 aa14.16□□□□□ -0.14
PRKCSH-217ENST00000592741 BORCS7-ASMTA0A0B4J1R7 106 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 F8W036 122 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 J3QW42 95 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 TUSC2O75896 110 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 CDS2O95674 445 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 CA6P23280 308 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 LPAR6P43657 344 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 HERPUD1Q15011 391 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 ZNF695Q8IW36 515 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 OR4D5Q8NGN0 318 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 MRPL30Q8TCC3 161 aaKnown RBP14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 SPIN2AQ99865 258 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 SPIN2BQ9BPZ2 258 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 ADCYAP1P18509 176 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 IL32P24001 234 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 TNFSF10P50591 281 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 SRSF3P84103 164 aaKnown RBP14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 MRPL49Q13405 166 aaKnown RBP14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 GNMTQ14749 295 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 SPATA46Q5T0L3 261 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 ZNF818PQ6ZRF7 136 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 C5orf24Q7Z6I8 188 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 TMEM56Q96MV1 263 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 OR51I2Q9H344 312 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 RHOFQ9HBH0 211 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 PARP11Q9NR21 331 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 LHX6Q9UPM6 363 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 TMEM56-RWDD3S4R434 201 aa14.15□□□□□ -0.14
PRKCSH-217ENST00000592741 TRBV6-6A0A0A6YYG2 114 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 J3QT63 122 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 NOVA1P51513 510 aaKnown RBP14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 CAV2P51636 162 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 PMP22Q01453 160 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 SWI5Q1ZZU3 235 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 GAPTQ8N292 157 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 RTL8AQ9BWD3 113 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 ARV1Q9H2C2 271 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 GLRX2Q9NS18 164 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 CARHSP1Q9Y2V2 147 aaKnown RBP14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 NKX2-6A6NCS4 301 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 HS3ST1O14792 307 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 UBE2NP61088 152 aaKnown RBP14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 TGFBR3Q03167 851 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 C10orf91Q5T1B1 145 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 RDH5Q92781 318 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 BSCL2Q96G97 398 aaPredicted RBP14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 TMEM231Q9H6L2 316 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 IFT22Q9H7X7 185 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 CDH20Q9HBT6 801 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 UQCC1Q9NVA1 299 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 ZDHHC8Q9ULC8 765 aa14.14□□□□□ -0.15
PRKCSH-217ENST00000592741 TRAV24A0A0B4J272 114 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 IGKV1D-13A0A0B4J2D9 117 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 IGKV1-6A0A0C4DH72 117 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 DUXBA0A1W2PPF3 345 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 HSD17B6O14756 317 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 IGKV1-13P0DP09 117 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 ZNF14P17017 642 aaPredicted RBP14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 SPINK2P20155 84 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 F2RL1P55085 397 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 ZNF169Q14929 603 aaPredicted RBP14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 SMUG1Q53HV7 270 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 BTNL8Q6UX41 500 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 CLEC9AQ6UXN8 241 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 Q6ZRG5 221 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 CMTM1Q8IZ96 169 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 SELENOHQ8IZQ5 122 aaKnown RBP14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 SPAG16Q8N0X2 631 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 DMBX1Q8NFW5 382 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 USB1Q9BQ65 265 aaKnown RBP14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 FAM212BQ9NTI7 297 aaPredicted RBP14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 SHANK1Q9Y566 2161 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 NCOR1O75376 2440 aa14.13□□□□□ -0.15
PRKCSH-217ENST00000592741 KNTC1P50748 2209 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 FAM74A7A6NL05 159 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 HLA-DRB3P79483 266 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 GUCA2BQ16661 112 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 FAM74A3Q4VXF1 159 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 PIP4P1Q86T03 277 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 VASH2Q86V25 355 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 PUSL1Q8N0Z8 303 aaKnown RBP14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 C17orf78Q8N4C9 275 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 SEC11CQ9BY50 192 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 DLL3Q9NYJ7 618 aa14.12□□□□□ -0.15
PRKCSH-217ENST00000592741 PLA2G2EQ9NZK7 142 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms