RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 PRAMEF5Q5TYX0 476 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 ZNF626Q68DY1 528 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 AWAT2Q6E213 333 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 GLIPR1L1Q6UWM5 242 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 BAIAP2L2Q6UXY1 529 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 OR11H6Q8NGC7 330 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 PLPPR1Q8TBJ4 325 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 DYRK2Q92630 601 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 CORO2AQ92828 525 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 UFD1Q92890 307 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 KIF25Q9UIL4 384 aa12.75□□□□□ -0.37
LIG3-215ENST00000592690 IGHV2-26A0A0B4J1V2 119 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 H3BUX3 64 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 SC5DO75845 299 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 OR7C1O76099 320 aaPredicted RBP12.74□□□□□ -0.37
LIG3-215ENST00000592690 CRYBA1P05813 215 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 LGALS4P56470 323 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 RPS25P62851 125 aaKnown RBP12.74□□□□□ -0.37
LIG3-215ENST00000592690 GPR50Q13585 617 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 TPBGQ13641 420 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 CDH26Q8IXH8 852 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 TMEM203Q969S6 136 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 SSX3Q99909 188 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 TMEM133Q9H2Q1 129 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 TAS2R3Q9NYW6 316 aa12.74□□□□□ -0.37
LIG3-215ENST00000592690 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 FAM90A8PA6NJQ4 464 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 ZNF780AO75290 641 aaPredicted RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 GTF2F2P13984 249 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 CDK2P24941 298 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 GLP1RP43220 463 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 RAG2P55895 527 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 C17orf58Q2M2W7 97 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 LRRC75BQ2VPJ9 315 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 RSBN1Q5VWQ0 802 aaPredicted RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 HEPN1Q6WQI6 88 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 LRRTM1Q86UE6 522 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 OR13A1Q8NGR1 328 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 OR5R1Q8NH85 324 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 DPCDQ9BVM2 203 aaPredicted RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 ISYNA1Q9NPH2 558 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 BLOC1S6Q9UL45 172 aa12.73□□□□□ -0.37
LIG3-215ENST00000592690 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 TBL2Q9Y4P3 447 aaKnown RBP12.73□□□□□ -0.37
LIG3-215ENST00000592690 MEIKINA0A087WXM9 373 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
LIG3-215ENST00000592690 NDUFA7O95182 113 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 UCHL1P09936 223 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 CPEP16870 476 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
LIG3-215ENST00000592690 GPR176Q14439 515 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
LIG3-215ENST00000592690 LY6EQ16553 131 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 MPV17LQ2QL34 196 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 HSD17B12Q53GQ0 312 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 UTF1Q5T230 341 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 ATAD3CQ5T2N8 411 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 BRICD5Q6PL45 260 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 TMEM91Q6ZNR0 172 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 GDPGP1Q6ZNW5 385 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 LINC00596Q86U02 117 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 PHYHIPQ92561 330 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 MGLLQ99685 303 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 BANF2Q9H503 90 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 OR6C3Q9NZP0 311 aa12.72□□□□□ -0.37
LIG3-215ENST00000592690 MEGF11A6BM72 1044 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
LIG3-215ENST00000592690 CGB3P0DN86 165 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 CGB7P0DN87 165 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 MGMTP16455 207 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 JUNBP17275 347 aaPredicted RBP12.71□□□□□ -0.37
LIG3-215ENST00000592690 KCNJ3P48549 501 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 PAX5Q02548 391 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 SSX2Q16385 188 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 DHRS7BQ6IAN0 325 aaPredicted RBP12.71□□□□□ -0.37
LIG3-215ENST00000592690 OR4P4Q8NGL7 312 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 OR4F5Q8NH21 305 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.37
LIG3-215ENST00000592690 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 ZNF747Q9BV97 191 aa12.71□□□□□ -0.37
LIG3-215ENST00000592690 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms