RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR2T6Q8NHC8 308 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 GHSRQ92847 366 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 PGLYRP3Q96LB9 341 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 ZNF286AQ9HBT8 521 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 TMEM138Q9NPI0 162 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 FOXJ3Q9UPW0 622 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 EFCAB10A6NFE3 127 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
APOC1-208ENST00000592535 F2RL2O00254 374 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 TSPAN15O95858 294 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 IGFBP3P17936 291 aaPredicted RBP11.17□□□□□ -0.62
APOC1-208ENST00000592535 HTR1DP28221 377 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 BDKRB2P30411 391 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 ZNF93P35789 620 aaPredicted RBP11.17□□□□□ -0.62
APOC1-208ENST00000592535 RPS11P62280 158 aaKnown RBP eCLIP11.17□□□□□ -0.62
APOC1-208ENST00000592535 DOC2BQ14184 412 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 UTF1Q5T230 341 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 AHSA2Q719I0 299 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 PLPPR1Q8TBJ4 325 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 CDCA4Q9BXL8 241 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 MMP27Q9H306 513 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
APOC1-208ENST00000592535 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 PSORS1C1Q9UIG5 152 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 KIF25Q9UIL4 384 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 PITPNC1Q9UKF7 332 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 ING4Q9UNL4 249 aa11.17□□□□□ -0.62
APOC1-208ENST00000592535 TRAV8-7A0A075B6U6 113 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 PNMA8CA0A1B0GUJ8 204 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 MAGEA13PA6NCF6 341 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 KCNAB3O43448 404 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 CGB3P0DN86 165 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 CGB7P0DN87 165 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 CD34P28906 385 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 C21orf33P30042 268 aaPredicted RBP11.16□□□□□ -0.62
APOC1-208ENST00000592535 VHLP40337 213 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 GLP1RP43220 463 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 BDH1Q02338 343 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 HABP2Q14520 560 aaPredicted RBP11.16□□□□□ -0.62
APOC1-208ENST00000592535 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 Q499Y3 187 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 YIF1BQ5BJH7 314 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 C11orf88Q6PI97 169 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 BPIFB6Q8NFQ5 453 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 OR13A1Q8NGR1 328 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 ZNF596Q8TC21 504 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 ZNF184Q99676 751 aaPredicted RBP11.16□□□□□ -0.62
APOC1-208ENST00000592535 METTL9Q9H1A3 318 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 PLCXD1Q9NUJ7 323 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 IL36GQ9NZH8 169 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
APOC1-208ENST00000592535 MEIKINA0A087WXM9 373 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 A0A087X0M5 115 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 A0A1B0GX30 115 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 A0A1W2PPK0 400 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 MYL12BO14950 172 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 GPX5O75715 221 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 SERPINA2P20848 420 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 NFYBP25208 207 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 RBM11P57052 281 aaKnown RBP11.15□□□□□ -0.62
APOC1-208ENST00000592535 TAS2R43P59537 309 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 HLA-DRB5Q30154 266 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 RSBN1Q5VWQ0 802 aaPredicted RBP11.15□□□□□ -0.62
APOC1-208ENST00000592535 Q6ZTK2 550 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 Q8N2B8 174 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 SUMF2Q8NBJ7 301 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 KIRREL1Q96J84 757 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 OR14A2Q96R54 314 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 BARHL1Q9BZE3 327 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 NCOR1P1Q9H4R4 102 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 CALYQ9NYX4 217 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 ST3GAL6Q9Y274 331 aa11.15□□□□□ -0.62
APOC1-208ENST00000592535 TRAV39A0A0B4J263 110 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 A0A1W2PP11 408 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 FAM90A22PA8MWA6 464 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 LEUTXA8MZ59 168 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 TOR1AO14656 332 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 OR7C1O76099 320 aaPredicted RBP11.14□□□□□ -0.63
APOC1-208ENST00000592535 CSTBP04080 98 aaKnown RBP11.14□□□□□ -0.63
APOC1-208ENST00000592535 FSTP19883 344 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 CD24P25063 80 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 WNT4P56705 351 aa11.14□□□□□ -0.63
APOC1-208ENST00000592535 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms