RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 NR1H4Q96RI1 486 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-239ENST00000592467 GPER1Q99527 375 aa16.25■□□□□ 0.19
CIRBP-239ENST00000592467 GAL3ST2Q9H3Q3 398 aa16.25■□□□□ 0.19
CIRBP-239ENST00000592467 NCOR1P1Q9H4R4 102 aa16.25■□□□□ 0.19
CIRBP-239ENST00000592467 RANBP3Q9H6Z4 567 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-239ENST00000592467 CHCHD3Q9NX63 227 aaKnown RBP16.25■□□□□ 0.19
CIRBP-239ENST00000592467 A0A087X0M5 115 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 A0A1B0GX30 115 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 CD1AP06126 327 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 GABRA5P31644 462 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 ZNF93P35789 620 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-239ENST00000592467 MED21Q13503 144 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 RSBN1Q5VWQ0 802 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-239ENST00000592467 ABHD12Q8N2K0 398 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 NANOGP1Q8N7R0 232 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 BPIFB6Q8NFQ5 453 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 PLPPR1Q8TBJ4 325 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 CDCA4Q9BXL8 241 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 FAM192AQ9GZU8 254 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 IFT22Q9H7X7 185 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 ZNF286AQ9HBT8 521 aa16.24■□□□□ 0.19
CIRBP-239ENST00000592467 FAM90A22PA8MWA6 464 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 HSPB6O14558 160 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 PIN1P1O15428 100 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 HTR3BO95264 441 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 WNT4P56705 351 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 PPP3R1P63098 170 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 BDH1Q02338 343 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 SLC34A1Q06495 639 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 RIPK1Q13546 671 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 RSU1Q15404 277 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 Q8N2B8 174 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 OR13A1Q8NGR1 328 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 OR14A2Q96R54 314 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 ZNF184Q99676 751 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-239ENST00000592467 LINC00574Q9H8X3 128 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 ZNF702PQ9H963 129 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 RAB18Q9NP72 206 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 ING3Q9NXR8 418 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 HILPDAQ9Y5L2 63 aa16.23■□□□□ 0.19
CIRBP-239ENST00000592467 PNMA8CA0A1B0GUJ8 204 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 A0A1W2PP11 408 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 FAM172BPA6NC97 362 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 ZNF729A6NN14 1252 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-239ENST00000592467 RBM11P57052 281 aaKnown RBP16.22■□□□□ 0.19
CIRBP-239ENST00000592467 TAS2R43P59537 309 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 PAN3Q58A45 887 aaKnown RBP16.22■□□□□ 0.19
CIRBP-239ENST00000592467 RNLSQ5VYX0 342 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 OR52W1Q6IF63 320 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 RTN4RL2Q86UN3 420 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 TMEM219Q86XT9 240 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 STX19Q8N4C7 294 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 OR4C13Q8NGP0 309 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 DERL3Q96Q80 235 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 METTL9Q9H1A3 318 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 TCF7L1Q9HCS4 588 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 PAK1IP1Q9NWT1 392 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-239ENST00000592467 KIF25Q9UIL4 384 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 ING4Q9UNL4 249 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 ST3GAL6Q9Y274 331 aa16.22■□□□□ 0.19
CIRBP-239ENST00000592467 KBTBD11-OT1A0A1B0GTJ5 212 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 LY6LH3BQJ8 138 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 HTR1DP28221 377 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 FBLN7Q53RD9 439 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 OSR2Q8N2R0 312 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 SGCDQ92629 289 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 KIRREL1Q96J84 757 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 SERTAD4Q9NUC0 356 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 OR6C3Q9NZP0 311 aa16.21■□□□□ 0.19
CIRBP-239ENST00000592467 A0A1W2PPK0 400 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 NPIPB11E5RHQ5 1161 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 GEMIN2O14893 280 aaKnown RBP16.2■□□□□ 0.18
CIRBP-239ENST00000592467 TIMM23O14925 209 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 CDK1P06493 297 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 CELP19835 753 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 AQP4P55087 323 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 GP2P55259 537 aaKnown RBP16.2■□□□□ 0.18
CIRBP-239ENST00000592467 C6orf141Q5SZD1 244 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 SUMF2Q8NBJ7 301 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 NDNFQ8TB73 568 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 WIPF2Q8TF74 440 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-239ENST00000592467 CFHR4Q92496 578 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 NPFFR1Q9GZQ6 430 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 DPM3Q9P2X0 92 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 FOXJ3Q9UPW0 622 aa16.2■□□□□ 0.18
CIRBP-239ENST00000592467 LSM2Q9Y333 95 aaKnown RBP16.2■□□□□ 0.18
CIRBP-239ENST00000592467 TET2Q6N021 2002 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-239ENST00000592467 MEIKINA0A087WXM9 373 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 MYL12BO14950 172 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 SERPINA2P20848 420 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 KCNJ3P48549 501 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 HABP2Q14520 560 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-239ENST00000592467 HLA-DRB5Q30154 266 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 Q6ZS46 218 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 OR4D6Q8NGJ1 314 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 ZNF596Q8TC21 504 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 DPCDQ9BVM2 203 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-239ENST00000592467 VCXQ9H320 206 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 ABCB10Q9NRK6 738 aa16.19■□□□□ 0.18
CIRBP-239ENST00000592467 CALYQ9NYX4 217 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms