RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 TRAPPC6BQ86SZ2 158 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 CHST4Q8NCG5 386 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 OR13A1Q8NGR1 328 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 PPP1R35Q8TAP8 253 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 TBC1D15Q8TC07 691 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 PHYHIPQ92561 330 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 DYRK2Q92630 601 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 JMJD8Q96S16 334 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 S100A13Q99584 98 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 DPCDQ9BVM2 203 aaPredicted RBP9.37□□□□□ -0.91
VMP1-211ENST00000591315 CHIAQ9BZP6 476 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 SELENOIQ9C0D9 397 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 ZNRD1Q9P1U0 126 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 LINC00312Q9Y6C7 94 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 MEGF11A6BM72 1044 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 CRTAPO75718 401 aaPredicted RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 CSN2P05814 226 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 RNASE1P07998 156 aaKnown RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 CD37P11049 281 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 GTF2F2P13984 249 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 MGMTP16455 207 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 CDK2P24941 298 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 CALRP27797 417 aaKnown RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 PSMB9P28065 219 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 GABRA5P31644 462 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 ACTG1P63261 375 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 C17orf58Q2M2W7 97 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 NHLRC3Q5JS37 347 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 UBE2UQ5VVX9 321 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 ZNF773Q6PK81 442 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 C5orf24Q7Z6I8 188 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 CDH26Q8IXH8 852 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 NKAIN3Q8N8D7 197 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 CORO2AQ92828 525 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 SLC25A28Q96A46 364 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 FOXRED1Q96CU9 486 aaPredicted RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 UQCC2Q9BRT2 126 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 YTHDF1Q9BYJ9 559 aaKnown RBP9.36□□□□□ -0.91
VMP1-211ENST00000591315 HEXA-AS1Q9H8Q6 139 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 NDUFB11Q9NX14 153 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 FAM96BQ9Y3D0 163 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 LRRC42Q9Y546 428 aa9.36□□□□□ -0.91
VMP1-211ENST00000591315 MEIKINA0A087WXM9 373 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 TRGV10A0A0A0MS01 117 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 A0A1W2PPH5 198 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 SMIM30A4D0T7 59 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 FAM181BA6NEQ2 426 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 ODF3BA8MYP8 253 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 CLPXO76031 633 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 MPIG6BO95866 241 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 IGHV3-7P01780 117 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 ARG1P05089 322 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 CGB3P0DN86 165 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 CGB7P0DN87 165 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 GLP1RP43220 463 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 IER3P46695 156 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 CLDN12P56749 244 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 OR10A3P58181 314 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 QRFPP83859 136 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 PLA2G7Q13093 441 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 UNC119Q13432 240 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 LTC4SQ16873 150 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 SVOPQ8N4V2 548 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 RFESDQ8TAC1 157 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 CCDC107Q8WV48 283 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 ZFAND2BQ8WV99 257 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 THRSPQ92748 146 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 GCDHQ92947 438 aaPredicted RBP9.35□□□□□ -0.91
VMP1-211ENST00000591315 LEAP2Q969E1 77 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 Q96M66 194 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 UBE2J1Q9Y385 318 aaPredicted RBP9.35□□□□□ -0.91
VMP1-211ENST00000591315 SESN1Q9Y6P5 492 aa9.35□□□□□ -0.91
VMP1-211ENST00000591315 A0A0A6YYD4 124 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 hCG_1809904A0A1W2PP81 198 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 A0A1W2PPE2 198 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 A0A1W2PR64 198 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 A0A1W2PRV1 198 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 TMEM89A2RUT3 159 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 CLDN34H7C241 214 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 SLC22A1O15245 554 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 MRPS14O60783 128 aaKnown RBP9.34□□□□□ -0.91
VMP1-211ENST00000591315 ZNF780AO75290 641 aaPredicted RBP9.34□□□□□ -0.91
VMP1-211ENST00000591315 RBP4P02753 201 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 FBP1P09467 338 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 HTR2CP28335 458 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 RAB13P51153 203 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 RELBQ01201 579 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
VMP1-211ENST00000591315 TRAM1Q15629 374 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 NEDD8Q15843 81 aa9.34□□□□□ -0.91
VMP1-211ENST00000591315 MPV17LQ2QL34 196 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms