RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, human

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-208	ENST00000588692	NR1H4	Q96RI1	486 aa	Predicted RBP	11.66	□□□□□ -0.54
DDX39A-208	ENST00000588692	S100A13	Q99584	98 aa		11.66	□□□□□ -0.54
DDX39A-208	ENST00000588692	METTL9	Q9H1A3	318 aa		11.66	□□□□□ -0.54
DDX39A-208	ENST00000588692	TRAV24	A0A0B4J272	114 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692		A6NDX4	124 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	F2RL2	O00254	374 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	XPNPEP2	O43895	674 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	ZNF780A	O75290	641 aa	Predicted RBP	11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	IGFBP3	P17936	291 aa	Predicted RBP	11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	CD34	P28906	385 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	OR3A4P	P47883	348 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	ARHGDIB	P52566	201 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	WNT4	P56705	351 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	SLC34A1	Q06495	639 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	LAIR2	Q6ISS4	152 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	AHSA2	Q719I0	299 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	LINC00596	Q86U02	117 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	ZNF565	Q8N9K5	539 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	OR13C5	Q8NGS8	318 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	THRSP	Q92748	146 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	TFAP2C	Q92754	450 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	CREB3L1	Q96BA8	519 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	BARHL1	Q9BZE3	327 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	PPIL3	Q9H2H8	161 aa	Known RBP	11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	MMP27	Q9H306	513 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	IFT22	Q9H7X7	185 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	PCDHB16	Q9NRJ7	776 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692	HILPDA	Q9Y5L2	63 aa		11.65	□□□□□ -0.54
DDX39A-208	ENST00000588692		A0A087X0M5	115 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692		A0A1B0GX30	115 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692		H3BUI4	141 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	HSPB6	O14558	160 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	HTR3B	O95264	441 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	IGLV1-47	P01700	117 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	CSTB	P04080	98 aa	Known RBP	11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	CD1A	P06126	327 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	RAB13	P51153	203 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	RBM11	P57052	281 aa	Known RBP	11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	RPS11	P62280	158 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	PIGY	Q3MUY2	71 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	OSR2	Q8N2R0	312 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	ZFP41	Q8N8Y5	198 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	OR10K1	Q8NGX5	313 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	ZNF184	Q99676	751 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	ING3	Q9NXR8	418 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	DPM3	Q9P2X0	92 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	ST3GAL6	Q9Y274	331 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	VWF	P04275	2813 aa		11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	TET2	Q6N021	2002 aa	Predicted RBP	11.64	□□□□□ -0.55
DDX39A-208	ENST00000588692	MEIKIN	A0A087WXM9	373 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	TRBV5-7	A0A0A0MS05	114 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	MEGF11	A6BM72	1044 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	LEUTX	A8MZ59	168 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ANKRD65	E5RJM6	399 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CDRT1	O95170	752 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	C21orf33	P30042	268 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CEACAM3	P40198	252 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	GLP1R	P43220	463 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	GPR176	Q14439	515 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	HERPUD1	Q15011	391 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	C2orf68	Q2NKX9	166 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692		Q6ZTK2	550 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692		Q8N2B8	174 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	BPIFB6	Q8NFQ5	453 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	OR14A2	Q96R54	314 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	NKX3-1	Q99801	234 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	FKBP14	Q9NWM8	211 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	KIF25	Q9UIL4	384 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ING4	Q9UNL4	249 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ERGIC3	Q9Y282	383 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	SIGLEC9	Q9Y336	463 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	WNK1	Q9H4A3	2382 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	FAM90A22P	A8MWA6	464 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	TOR1A	O14656	332 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CGB3	P0DN86	165 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CGB7	P0DN87	165 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	MAPK3	P27361	379 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	BRS3	P32247	399 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	GDNF	P39905	211 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	PRRX1	P54821	245 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	C17orf58	Q2M2W7	97 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	MPV17L	Q2QL34	196 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	HLA-DRB5	Q30154	266 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	TMEM219	Q86XT9	240 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CDH26	Q8IXH8	852 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	NANOGP1	Q8N7R0	232 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ORAI1	Q96D31	301 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	KIRREL1	Q96J84	757 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	DPCD	Q9BVM2	203 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	LINC00574	Q9H8X3	128 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ZNF702P	Q9H963	129 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	ZNF286A	Q9HBT8	521 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	CALY	Q9NYX4	217 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	FOXJ3	Q9UPW0	622 aa		11.63	□□□□□ -0.55
DDX39A-208	ENST00000588692	TRAV8-7	A0A075B6U6	113 aa		11.62	□□□□□ -0.55
DDX39A-208	ENST00000588692	OOSP1	A8MZH6	123 aa		11.62	□□□□□ -0.55
DDX39A-208	ENST00000588692	OR7C1	O76099	320 aa	Predicted RBP	11.62	□□□□□ -0.55

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