RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RAI1Q7Z5J4 1906 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 TRAV6A0A075B6T7 132 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 TMEM82A0PJX8 343 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 LRRC30A6NM36 301 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 DISC1C4P0D8 188 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 INMT-MINDY4F8WBC2 141 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 IRF2P14316 349 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 RBMS2Q15434 407 aaKnown RBP21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 AGAP6Q5VW22 663 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 RSBN1Q5VWQ0 802 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 ZNF497Q6ZNH5 498 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 OVCH2Q7RTZ1 564 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 Q9N2K0 584 aa21.8■■□□□ 1.08
SCAMP4-210ENST00000588555 ZNF737O75373 536 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 CHRFAM7AQ494W8 412 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 TEX36Q5VZQ5 186 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ZNF880Q6PDB4 577 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 IDO2Q6ZQW0 420 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ZNF286AQ9HBT8 521 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 FUOMA2VDF0 154 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ZNF205O95201 554 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 GOSR1O95249 250 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 OR3A1P47881 315 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ATXN7L3Q14CW9 347 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ZMYND11Q15326 602 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 STUMQ69YW2 141 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 CADM3Q8N126 398 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 ARRDC1Q8N5I2 433 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 OR13C8Q8NGS7 320 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 MRGPRFQ96AM1 343 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 PRRT1Q99946 306 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 VRK1Q99986 396 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 SPOCK3Q9BQ16 436 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 SHARPINQ9H0F6 387 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 SCP2D1Q9UJQ7 156 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 FBXO9Q9UK97 447 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 FLVCR2Q9UPI3 526 aa21.79■■□□□ 1.08
SCAMP4-210ENST00000588555 DSCAMO60469 2012 aa21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 TMEM178BH3BS89 294 aa21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 BCAP31P51572 246 aa21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 BTG1P62324 171 aa21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 TRAF4Q9BUZ4 470 aaPredicted RBP21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 TMEM106BQ9NUM4 274 aa21.78■■□□□ 1.08
SCAMP4-210ENST00000588555 IFNA6P05013 189 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 H2AFB2P0C5Z0 115 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 MUC1P15941 1255 aaPredicted RBP21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 OR3A3P47888 321 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 RAG2P55895 527 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 RAB25P57735 213 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 CDK10Q15131 360 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 CCL17Q92583 94 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 GINS4Q9BRT9 223 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 EHFQ9NZC4 300 aa21.77■■□□□ 1.08
SCAMP4-210ENST00000588555 IGHV1-69-2A0A0G2JMI3 117 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 OOEPA6NGQ2 149 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 POM121CA8CG34 1229 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 SDCBPO00560 298 aaPredicted RBP21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 KCNJ3P48549 501 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 ARPC4P59998 168 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 TATDN3Q17R31 274 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 SCGB2B2Q4G0G5 96 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 C1orf87Q8N0U7 546 aa21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 ASCC1Q8N9N2 400 aaKnown RBP21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 SLC25A21Q9BQT8 299 aaPredicted RBP21.76■■□□□ 1.07
SCAMP4-210ENST00000588555 H7C1Q1 480 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 ARPC1BO15143 372 aaKnown RBP21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 GSTT2P0CG29 244 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 GABRA2P47869 451 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 PAX5Q02548 391 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 DEFB108BQ8NET1 73 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 SDSLQ96GA7 329 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 COQ2Q96H96 371 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 ING3Q9NXR8 418 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 MAB21L2Q9Y586 359 aa21.75■■□□□ 1.07
SCAMP4-210ENST00000588555 LGALS8O00214 317 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 RCC1P18754 421 aaPredicted RBP21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 GRK1Q15835 563 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 LHFPL1Q86WI0 220 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 UBTD1Q9HAC8 227 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 NECAP2Q9NVZ3 263 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 CLEC18AA5D8T8 446 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 PEX14O75381 377 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 MECP2P51608 486 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 ZNF660Q6AZW8 331 aaPredicted RBP21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 SLC35E4Q6ICL7 350 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 CLEC18BQ6UXF7 455 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 C5orf24Q7Z6I8 188 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 CLEC18CQ8NCF0 446 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 SNX22Q96L94 193 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 MBNL3Q9NUK0 354 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 LAMP3Q9UQV4 416 aa21.74■■□□□ 1.07
SCAMP4-210ENST00000588555 KIR2DS1A0A191URI9 304 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 TRDCB7Z8K6 153 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 OR5H8P0DN80 308 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 KIR2DS4P43632 304 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 TSPAN5P62079 268 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 AESQ08117 197 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 KIR2DS1Q14954 304 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 ZNF788Q6ZQV5 615 aa21.73■■□□□ 1.07
SCAMP4-210ENST00000588555 MOB1BQ7L9L4 216 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms