RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 IL13RA2Q14627 380 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 C22orf42Q6IC83 251 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 Q6ZSV7 163 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 DMRTB1Q96MA1 342 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 AK6Q9Y3D8 172 aaKnown RBP12.82□□□□□ -0.36
NCLN-203ENST00000587740 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 TRAV1-2A0A0B4J238 106 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 ZNF737O75373 536 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 UBBP0CG47 229 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 GTF2F2P13984 249 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 JUNBP17275 347 aaPredicted RBP12.81□□□□□ -0.36
NCLN-203ENST00000587740 LMO1P25800 156 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 HTR2CP28335 458 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 RANBP1P43487 201 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 IER3P46695 156 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 GRK1Q15835 563 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 PIGYQ3MUY2 71 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 C1orf100Q5SVJ3 147 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 CHST4Q8NCG5 386 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 LY6G5BQ8NDX9 201 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 OR51E2Q9H255 320 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 PLGRKTQ9HBL7 147 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 TXNL4BQ9NX01 149 aaKnown RBP12.81□□□□□ -0.36
NCLN-203ENST00000587740 ST3GAL6Q9Y274 331 aa12.81□□□□□ -0.36
NCLN-203ENST00000587740 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 A0A1W2PP11 408 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 CRTAPO75718 401 aaPredicted RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 TOX4O94842 621 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 CD37P11049 281 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 GADD45AP24522 165 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 EDDM3BP56851 147 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 ARF6P62330 175 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 RPL31P62899 125 aaKnown RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 NHLRC3Q5JS37 347 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 KPRPQ5T749 579 aaPredicted RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 METTL11BQ5VVY1 283 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 Q6P435 159 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 LINC00596Q86U02 117 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 CMTM4Q8IZR5 234 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 OR4M1Q8NGD0 313 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 OR6M1Q8NGM8 313 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
NCLN-203ENST00000587740 CHCHD6Q9BRQ6 235 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 CHST6Q9GZX3 395 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 ONECUT1Q9UBC0 465 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 V9GY05 133 aa12.8□□□□□ -0.36
NCLN-203ENST00000587740 A0A0U1RQK1 487 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 LOC100506127A0A0U1RQW1 187 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 SLC33A1O00400 549 aaPredicted RBP12.79□□□□□ -0.36
NCLN-203ENST00000587740 SLC17A2O00624 439 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 MGST3O14880 152 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 SLC22A1O15245 554 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 PSPNO60542 156 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 RAB3BP20337 219 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 MPV17LQ2QL34 196 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 OR4S1Q8NGB4 309 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 WDFY2Q96P53 400 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 GFI1Q99684 422 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 MRPS26Q9BYN8 205 aaKnown RBP12.79□□□□□ -0.36
NCLN-203ENST00000587740 CST11Q9H112 138 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 BANF2Q9H503 90 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 KPTNQ9Y664 436 aa12.79□□□□□ -0.36
NCLN-203ENST00000587740 DNAH3Q8TD57 4116 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 A0A1W2PPH5 198 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 GEMIN2O14893 280 aaKnown RBP12.78□□□□□ -0.36
NCLN-203ENST00000587740 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
NCLN-203ENST00000587740 BPNT1O95861 308 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 MGMTP16455 207 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 OR3A1P47881 315 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 EDDM3AQ14507 147 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 RAB11BQ15907 218 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 SAMD5Q5TGI4 173 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 LHX4Q969G2 390 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 SELENOIQ9C0D9 397 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 PPA2Q9H2U2 334 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 C19orf12Q9NSK7 152 aa12.78□□□□□ -0.36
NCLN-203ENST00000587740 SHISA3A0PJX4 238 aa12.77□□□□□ -0.37
NCLN-203ENST00000587740 FUOMA2VDF0 154 aa12.77□□□□□ -0.37
NCLN-203ENST00000587740 CSF1P09603 554 aa12.77□□□□□ -0.37
NCLN-203ENST00000587740 VSIG8P0DPA2 414 aa12.77□□□□□ -0.37
NCLN-203ENST00000587740 MEF2CQ06413 473 aaPredicted RBP12.77□□□□□ -0.37
NCLN-203ENST00000587740 BLMHQ13867 455 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms