RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 SIGLECL1Q8N7X8 197 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF565Q8N9K5 539 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 OR4M1Q8NGD0 313 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 OR10K1Q8NGX5 313 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 VCX3AQ9NNX9 186 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 SESN1Q9Y6P5 492 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 SVEP1Q4LDE5 3571 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 SHISA3A0PJX4 238 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 ODAMA1E959 279 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 OR7C1O76099 320 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 CDRT1O95170 752 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 PAHP00439 452 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 MYL9P24844 172 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 CALRP27797 417 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 DUSP1P28562 367 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 DLX6P56179 175 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 FAM189A2Q15884 450 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 KRTAP24-1Q3LI83 254 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC22A6Q4U2R8 563 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 C11orf42Q8N5U0 333 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 ZDHHC22Q8N966 263 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 OR5R1Q8NH85 324 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 GFI1Q99684 422 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 OR51E2Q9H255 320 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 PPA2Q9H2U2 334 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 RCC2Q9P258 522 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
PRKCSH-202ENST00000585540 IGHV3OR16-10A0A075B7F0 116 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 TRAV1-2A0A0B4J238 106 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 TRAV24A0A0B4J272 114 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC22A1O15245 554 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 MGMTP16455 207 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 CCL3L1P16619 93 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 CD36P16671 472 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 GADD45AP24522 165 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 CFPP27918 469 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 HTR2CP28335 458 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 LGALS4P56470 323 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 PIGYQ3MUY2 71 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 C22orf42Q6IC83 251 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 HEPN1Q6WQI6 88 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 OR2W3Q7Z3T1 314 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 BCL6BQ8N143 479 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 DTX3Q8N9I9 347 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 OR4D6Q8NGJ1 314 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 KCNG3Q8TAE7 436 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 CREB3L1Q96BA8 519 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 C1orf147Q96MC9 270 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 DPCDQ9BVM2 203 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 AK6Q9Y3D8 172 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-202ENST00000585540 A0A1W2PP11 408 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC17A2O00624 439 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 MELTFP08582 738 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 CD34P28906 385 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 FGF9P31371 208 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 SAA4P35542 130 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 SCN1BQ07699 218 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF626Q68DY1 528 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 COQ2Q96H96 371 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 Q96M66 194 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 URM1Q9BTM9 101 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 RNF167Q9H6Y7 350 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 MINOS1-NBL1R4GNA1 71 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 ATRQ13535 2644 aa11.28□□□□□ -0.6
PRKCSH-202ENST00000585540 A0A087X0M5 115 aa11.27□□□□□ -0.61
PRKCSH-202ENST00000585540 A0A1B0GX30 115 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms