RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IGSF23A1L1A6 192 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PITX3O75364 302 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CLN5O75503 358 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CFIP05156 583 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SULT1A1P50225 295 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 NRN1LQ496H8 165 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 WDR5BQ86VZ2 330 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF695Q8IW36 515 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SPIN2AQ99865 258 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SPIN2BQ9BPZ2 258 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 Q9N2K0 584 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FRYLO94915 3013 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 NAPSAO96009 420 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TK1P04183 234 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RAB5AP20339 215 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CLINT1Q14677 625 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SELENOHQ8IZQ5 122 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SUMF1Q8NBK3 374 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF845Q96IR2 970 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ABHD14BQ96IU4 210 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PAPOLGQ9BWT3 736 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PLEKHF2Q9H8W4 249 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 DEPPQ9NTK1 212 aa12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MRPS18CQ9Y3D5 142 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CCDC163A0A0D9SF12 145 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGHEP01854 428 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 S100A8P05109 93 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 BCL3P20749 454 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SPIN3Q5JUX0 258 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF818PQ6ZRF7 136 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PPP1R32Q7Z5V6 425 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1B0GV50 99 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CLEC18AA5D8T8 446 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF724A8MTY0 619 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PROB1E7EW31 1015 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GFRA1P56159 465 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TMEM252Q8N6L7 170 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CLEC18CQ8NCF0 446 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR56B2PQ8NGI1 322 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SLC25A31Q9H0C2 315 aa12.19□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1W2PPE3 182 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SSSCA1O60232 199 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGHV3-9P01782 118 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SCTP09683 121 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FGF12P61328 243 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RAB1AP62820 205 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FOXO1Q12778 655 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HERPUD1Q15011 391 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CXorf66Q5JRM2 361 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SAXO1Q8IYX7 474 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GAPTQ8N292 157 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FAM24BQ8N5W8 94 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HLA-CQ95604 372 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SLAMF9Q96A28 289 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RARRES2Q99969 163 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FGF23Q9GZV9 251 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RFNGQ9Y644 331 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 hCG_1809904A0A1W2PP81 198 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1W2PR64 198 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1W2PRV1 198 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SLC22A20A6NK97 555 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GPR37O15354 613 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ADAM20O43506 726 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TUSC2O75896 110 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ARG1P05089 322 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OMGP23515 440 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GDF1P27539 372 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HOXA6P31267 233 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RPS18P62269 152 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ACER2Q5QJU3 275 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 METTL1Q9UBP6 276 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGKV1D-13A0A0B4J2D9 117 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGKV1-13P0DP09 117 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CBR1P16152 277 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 VDAC1P21796 283 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 UCP1P25874 307 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OTX2P32243 289 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MAS1LP35410 378 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CCL20P78556 96 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms