RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CD24P25063 80 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 SLC6A1P30531 599 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 PTGFRP43088 359 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 KLHL22Q53GT1 634 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 Q6P435 159 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 KBTBD11-OT1A0A1B0GTJ5 212 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 K7EIL1 84 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 CASQ2O14958 399 aaPredicted RBP11.94□□□□□ -0.5
VAPA-209ENST00000585042 DEGS1O15121 323 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 HTR1AP08908 422 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 CGB3P0DN86 165 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 CGB7P0DN87 165 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 CALCBP10092 127 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 ZNF44P15621 663 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 GABRB1P18505 474 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 RAB40BQ12829 278 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
VAPA-209ENST00000585042 BAIAP2L2Q6UXY1 529 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 OR9G1Q8NH87 305 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 LINC00574Q9H8X3 128 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
VAPA-209ENST00000585042 ZMAT5Q9UDW3 170 aaKnown RBP11.94□□□□□ -0.5
VAPA-209ENST00000585042 EXOGQ9Y2C4 368 aaKnown RBP11.94□□□□□ -0.5
VAPA-209ENST00000585042 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
VAPA-209ENST00000585042 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
VAPA-209ENST00000585042 SNU13P55769 128 aaKnown RBP11.93□□□□□ -0.5
VAPA-209ENST00000585042 NANOS3P60323 173 aaKnown RBP11.93□□□□□ -0.5
VAPA-209ENST00000585042 PAX5Q02548 391 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 SCN1BQ07699 218 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 C17orf58Q2M2W7 97 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 ELP2Q6IA86 826 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 SERPINA12Q8IW75 414 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 OR51D1Q8NGF3 324 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 OR13C3Q8NGS6 347 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 LGALS12Q96DT0 336 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 COQ2Q96H96 371 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
VAPA-209ENST00000585042 VCX3BQ9H321 246 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 ZCCHC4Q9H5U6 513 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.56e-7■■□□□ 13.2
VAPA-209ENST00000585042 ZFP57Q9NU63 452 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 MOB4Q9Y3A3 225 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 HSPE1-MOB4S4R3N1 261 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 DNAH3Q8TD57 4116 aa11.93□□□□□ -0.5
VAPA-209ENST00000585042 OR4C45A6NMZ5 311 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 C21orf33P30042 268 aaPredicted RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 GDNFP39905 211 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 OR3A4PP47883 348 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 MTNR1BP49286 362 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 MRPL28Q13084 256 aaKnown RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 DCTN2Q13561 401 aaKnown RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 ALKBH1Q13686 389 aaKnown RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 CDK5R1Q15078 307 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 DEFB121Q5J5C9 76 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 LINC00482Q8N8I6 264 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 OR51T1Q8NGJ9 327 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 HAVCR2Q8TDQ0 301 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 RFT1Q96AA3 541 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 RPEQ96AT9 228 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 CPNE2Q96FN4 548 aaPredicted RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 BARHL1Q9BZE3 327 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 AMBNQ9NP70 447 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 MRPS18AQ9NVS2 196 aaKnown RBP11.92□□□□□ -0.5
VAPA-209ENST00000585042 AASSQ9UDR5 926 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 MYRFQ9Y2G1 1151 aa11.92□□□□□ -0.5
VAPA-209ENST00000585042 COL7A1Q02388 2944 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 J3QR06 171 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 FGF16O43320 207 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 TMEM225BP0DP42 221 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 CAPGP40121 348 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 KCNJ3P48549 501 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 RAB7AP51149 207 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 MED21Q13503 144 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 GALEQ14376 348 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 KISS1Q15726 138 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
VAPA-209ENST00000585042 OR8H3Q8N146 312 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 PARP16Q8N5Y8 322 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 COMMD1Q8N668 190 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 OR51A4Q8NGJ6 313 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 OR13C9Q8NGT0 318 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 DPF1Q92782 380 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 PELI1Q96FA3 418 aa11.91□□□□□ -0.5
VAPA-209ENST00000585042 FAM172BPA6NC97 362 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 J3QLW9 94 aa11.9□□□□□ -0.5
VAPA-209ENST00000585042 SULT1B1O43704 296 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms