RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PIGYQ3MUY2 71 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 GLIPR1L1Q6UWM5 242 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 HEPN1Q6WQI6 88 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 GAPTQ8N292 157 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 TPRX1Q8N7U7 411 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 BEND2Q8NDZ0 799 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 SSMEM1Q8WWF3 244 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 SLC25A28Q96A46 364 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 NKX3-1Q99801 234 aaPredicted RBP10.28□□□□□ -0.76
SNORD55-201ENST00000581525 TCF7L1Q9HCS4 588 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
SNORD55-201ENST00000581525 MRPS28Q9Y2Q9 187 aaKnown RBP10.28□□□□□ -0.76
SNORD55-201ENST00000581525 A0A087X0M5 115 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 A0A1B0GX30 115 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 A0A1W2PP11 408 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 ODAMA1E959 279 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 SLC22A1O15245 554 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 UBBP0CG47 229 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 CD34P28906 385 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 SNU13P55769 128 aaKnown RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 RPS25P62851 125 aaKnown RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 QRFPP83859 136 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 FABP5Q01469 135 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 RSBN1Q5VWQ0 802 aaPredicted RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 GLT8D1Q68CQ7 371 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF626Q68DY1 528 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 SLC35E4Q6ICL7 350 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 SVOPQ8N4V2 548 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 SUMF2Q8NBJ7 301 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 MUL1Q969V5 352 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 NR1H4Q96RI1 486 aaPredicted RBP10.27□□□□□ -0.77
SNORD55-201ENST00000581525 S100A13Q99584 98 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 GFI1Q99684 422 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 BARHL1Q9BZE3 327 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 NDUFB11Q9NX14 153 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 OR6C3Q9NZP0 311 aa10.27□□□□□ -0.77
SNORD55-201ENST00000581525 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 TRAV1-2A0A0B4J238 106 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 MEIOCA2RUB1 952 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF729A6NN14 1252 aaPredicted RBP10.26□□□□□ -0.77
SNORD55-201ENST00000581525 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 NPIPB11E5RHQ5 1161 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 ARL6IP5O75915 188 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 HSMCR30P0CW71 290 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 CFPP27918 469 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 SCN1BQ07699 218 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 EDDM3AQ14507 147 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 C17orf58Q2M2W7 97 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 SLC22A6Q4U2R8 563 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 KRBOX4Q5JUW0 171 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 PNKDQ8N490 385 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 JAGN1Q8N5M9 183 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 TMEM104Q8NE00 496 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 PLPPR1Q8TBJ4 325 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 TMEM203Q969S6 136 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 MALSU1Q96EH3 234 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 Q96M66 194 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 FAM192AQ9GZU8 254 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 DPAGT1Q9H3H5 408 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 SPACA1Q9HBV2 294 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF581Q9P0T4 197 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 TBL2Q9Y4P3 447 aaKnown RBP10.26□□□□□ -0.77
SNORD55-201ENST00000581525 SESN1Q9Y6P5 492 aa10.26□□□□□ -0.77
SNORD55-201ENST00000581525 KBTBD11-OT1A0A1B0GTJ5 212 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 TRDV1A0A1B0GX56 115 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 TMEM14DPA8MWL7 114 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 H3BUI4 141 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 MMP23AO75900 390 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 CLPXO76031 633 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 IGLV1-47P01700 117 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 VSIG8P0DPA2 414 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 GZMHP20718 246 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 SERPINA2P20848 420 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
SNORD55-201ENST00000581525 TAF9Q16594 264 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 PAN3Q58A45 887 aaKnown RBP10.25□□□□□ -0.77
SNORD55-201ENST00000581525 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 AWAT2Q6E213 333 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 SIGIRRQ6IA17 410 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 OR52W1Q6IF63 320 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF773Q6PK81 442 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF497Q6ZNH5 498 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 SLC16A12Q6ZSM3 486 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 RTN4RL2Q86UN3 420 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 ZNF565Q8N9K5 539 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 OR10A7Q8NGE5 316 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 PIFOQ8TCI5 191 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 DYRK2Q92630 601 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 FCGR1BQ92637 280 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 DPCDQ9BVM2 203 aaPredicted RBP10.25□□□□□ -0.77
SNORD55-201ENST00000581525 CHIAQ9BZP6 476 aa10.25□□□□□ -0.77
SNORD55-201ENST00000581525 TMEM133Q9H2Q1 129 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms