RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 C1orf123Q9NWV4 160 aa8.72□□□□□ -1.01
TOP3A-210ENST00000580713 DAPK2Q9UIK4 370 aa8.72□□□□□ -1.01
TOP3A-210ENST00000580713 RHBDD3Q9Y3P4 386 aa8.72□□□□□ -1.01
TOP3A-210ENST00000580713 U3KQK5 164 aa8.72□□□□□ -1.01
TOP3A-210ENST00000580713 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
TOP3A-210ENST00000580713 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.01
TOP3A-210ENST00000580713 IGKV1-9A0A0C4DH69 117 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 A6NLC8 198 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 IFITM5A6NNB3 132 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 ZNF850A8MQ14 1090 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 AIPO00170 330 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 FCN3O75636 299 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 CST4P01036 141 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 PF4P02776 101 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 ALDOBP05062 364 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 GRPP07492 148 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 PRKACBP22694 351 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 CA6P23280 308 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 AZGP1P25311 298 aaKnown RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 HOXD3P31249 432 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 UBE2E1P51965 193 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 PRDX4Q13162 271 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 HABP2Q14520 560 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 LRRC75BQ2VPJ9 315 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 HES5Q5TA89 166 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 PLCXD3Q63HM9 321 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 MOB3CQ70IA8 216 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 KRT74Q7RTS7 529 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 CDH26Q8IXH8 852 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 ZDHHC23Q8IYP9 409 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 OR52N4Q8NGI2 321 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 FOXRED1Q96CU9 486 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 CCL13Q99616 98 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 DCTN5Q9BTE1 182 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 SLC7A11Q9UPY5 501 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 NOP16Q9Y3C1 178 aaKnown RBP8.71□□□□□ -1.02
TOP3A-210ENST00000580713 MPC1Q9Y5U8 109 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 A3GALT2U3KPV4 340 aa8.71□□□□□ -1.02
TOP3A-210ENST00000580713 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 A0A075B6Q4 140 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 A0A1B0GWJ7 208 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 SLC17A2O00624 439 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 TMEM127O75204 238 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 CD37P11049 281 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 SLC2A2P11168 524 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 ZNF93P35789 620 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 DMRTC1Q5HYR2 192 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 MZT2AQ6P582 158 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 ZNF826PQ6ZT77 177 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 Q8N7P7 452 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 TRMT10AQ8TBZ6 339 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 C17orf50Q8WW18 174 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 ACOT12Q8WYK0 555 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 H1FXQ92522 213 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 DPF1Q92782 380 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 SPSB1Q96BD6 273 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 RCC1LQ96I51 464 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 SPACA5Q96QH8 159 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 HIST1H2AAQ96QV6 131 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 GPER1Q99527 375 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 UQCC2Q9BRT2 126 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 ADAT1Q9BUB4 502 aaKnown RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 C6orf62Q9GZU0 229 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-210ENST00000580713 ABCB9Q9NP78 766 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 KAAG1Q9UBP8 84 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 STEAP1Q9UHE8 339 aa8.7□□□□□ -1.02
TOP3A-210ENST00000580713 A0A1B0GW55 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 NDUFB3O43676 98 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 CHST1O43916 411 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L2P0CJ85 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L3P0CJ86 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L4P0CJ87 422 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L5P0CJ88 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L6P0CJ89 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DUX4L7P0CJ90 424 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 PAX6P26367 422 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 HTR2CP28335 458 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 S100A5P33763 92 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 RANBP1P43487 201 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 RBP2P50120 134 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 BMXP51813 675 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 FUT6P51993 359 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 ATP1B3P54709 279 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DYNC1I2Q13409 638 aaKnown RBP8.69□□□□□ -1.02
TOP3A-210ENST00000580713 IKZF1Q13422 519 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 DCTN2Q13561 401 aaKnown RBP8.69□□□□□ -1.02
TOP3A-210ENST00000580713 KISS1Q15726 138 aa8.69□□□□□ -1.02
TOP3A-210ENST00000580713 RAB11BQ15907 218 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms