RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TRAV8-7A0A075B6U6 113 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 PNMA8CA0A1B0GUJ8 204 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 H0YHG0 523 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 CDRT1O95170 752 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 MAPK3P27361 379 aaPredicted RBP12.01□□□□□ -0.49
SS18-212ENST00000579061 CD34P28906 385 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 DYNLT3P51808 116 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 RBM11P57052 281 aaKnown RBP12.01□□□□□ -0.49
SS18-212ENST00000579061 DYNC1I2Q13409 638 aaKnown RBP12.01□□□□□ -0.49
SS18-212ENST00000579061 DOC2BQ14184 412 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 GPR176Q14439 515 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 ATXN7L3Q14CW9 347 aaPredicted RBP12.01□□□□□ -0.49
SS18-212ENST00000579061 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 LDLRAD2Q5SZI1 272 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 DYNAPQ8N1N2 210 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 OSR2Q8N2R0 312 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 MS4A15Q8N5U1 240 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 DTX3Q8N9I9 347 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 PIFOQ8TCI5 191 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 ANKRD60Q9BZ19 345 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 BARHL1Q9BZE3 327 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 RANBP3Q9H6Z4 567 aaPredicted RBP12.01□□□□□ -0.49
SS18-212ENST00000579061 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 TPRKBQ9Y3C4 175 aa12.01□□□□□ -0.49
SS18-212ENST00000579061 ERICH4A6NGS2 130 aa12□□□□□ -0.49
SS18-212ENST00000579061 MMP23AO75900 390 aa12□□□□□ -0.49
SS18-212ENST00000579061 CGB3P0DN86 165 aa12□□□□□ -0.49
SS18-212ENST00000579061 CGB7P0DN87 165 aa12□□□□□ -0.49
SS18-212ENST00000579061 CDK2P24941 298 aa12□□□□□ -0.49
SS18-212ENST00000579061 HSPA13P48723 471 aa12□□□□□ -0.49
SS18-212ENST00000579061 PROK1P58294 105 aa12□□□□□ -0.49
SS18-212ENST00000579061 SLC35A2P78381 396 aa12□□□□□ -0.49
SS18-212ENST00000579061 GPR50Q13585 617 aa12□□□□□ -0.49
SS18-212ENST00000579061 IRF3Q14653 427 aa12□□□□□ -0.49
SS18-212ENST00000579061 MPV17LQ2QL34 196 aa12□□□□□ -0.49
SS18-212ENST00000579061 PIGYQ3MUY2 71 aa12□□□□□ -0.49
SS18-212ENST00000579061 ABHD12Q8N2K0 398 aa12□□□□□ -0.49
SS18-212ENST00000579061 NKAIN3Q8N8D7 197 aa12□□□□□ -0.49
SS18-212ENST00000579061 ZNF565Q8N9K5 539 aa12□□□□□ -0.49
SS18-212ENST00000579061 OR4D6Q8NGJ1 314 aa12□□□□□ -0.49
SS18-212ENST00000579061 ZNF596Q8TC21 504 aa12□□□□□ -0.49
SS18-212ENST00000579061 MRPS24Q96EL2 167 aaKnown RBP12□□□□□ -0.49
SS18-212ENST00000579061 CITED1Q99966 193 aa12□□□□□ -0.49
SS18-212ENST00000579061 PPIL3Q9H2H8 161 aaKnown RBP12□□□□□ -0.49
SS18-212ENST00000579061 DUSP21Q9H596 190 aa12□□□□□ -0.49
SS18-212ENST00000579061 ABCB10Q9NRK6 738 aa12□□□□□ -0.49
SS18-212ENST00000579061 FBLN5Q9UBX5 448 aa12□□□□□ -0.49
SS18-212ENST00000579061 TRRAPQ9Y4A5 3859 aa12□□□□□ -0.49
SS18-212ENST00000579061 A0A087X0M5 115 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 A0A1B0GX30 115 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 MEGF11A6BM72 1044 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 MAGEA13PA6NCF6 341 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 PIN1P1O15428 100 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 GTF2F2P13984 249 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 SERPINA2P20848 420 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 PAX6P26367 422 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 HTR1DP28221 377 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 KIR2DS4P43632 304 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 SPHARQ15513 63 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 FAM189A2Q15884 450 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 SSX2Q16385 188 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 LY6EQ16553 131 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 C17orf58Q2M2W7 97 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 PRAMEF5Q5TYX0 476 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 RSBN1Q5VWQ0 802 aaPredicted RBP11.99□□□□□ -0.49
SS18-212ENST00000579061 UNQ9370/PRO34162Q6UXP9 181 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 OR4P4Q8NGL7 312 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 NKX3-1Q99801 234 aaPredicted RBP11.99□□□□□ -0.49
SS18-212ENST00000579061 LINC00574Q9H8X3 128 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 PITPNC1Q9UKF7 332 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 MRPS28Q9Y2Q9 187 aaKnown RBP11.99□□□□□ -0.49
SS18-212ENST00000579061 LSM2Q9Y333 95 aaKnown RBP11.99□□□□□ -0.49
SS18-212ENST00000579061 MGAM2Q2M2H8 2515 aa11.99□□□□□ -0.49
SS18-212ENST00000579061 PKD1L1Q8TDX9 2849 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 MEIKINA0A087WXM9 373 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 A0A1W2PPK0 400 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 HSPB6O14558 160 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 OR7C1O76099 320 aaPredicted RBP11.98□□□□□ -0.49
SS18-212ENST00000579061 IGLV1-47P01700 117 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 MAS1P04201 325 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 SLC22A6Q4U2R8 563 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 SLC35E4Q6ICL7 350 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 C11orf88Q6PI97 169 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 BRICD5Q6PL45 260 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 JAGN1Q8N5M9 183 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 SUMF2Q8NBJ7 301 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 NDNFQ8TB73 568 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 PLPPR1Q8TBJ4 325 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 CREB3L1Q96BA8 519 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 OR5M11Q96RB7 305 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 DPCDQ9BVM2 203 aaPredicted RBP11.98□□□□□ -0.49
SS18-212ENST00000579061 NPFFR1Q9GZQ6 430 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 DPM3Q9P2X0 92 aa11.98□□□□□ -0.49
SS18-212ENST00000579061 A6NDX4 124 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms