RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 GPR50Q13585 617 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 RBM39Q14498 530 aaKnown RBP5.34□□□□□ -1.55
TRAF4-213ENST00000578917 IL13RA2Q14627 380 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 TRAM1Q15629 374 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 TAF9Q16594 264 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 LTC4SQ16873 150 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 LRRC75BQ2VPJ9 315 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 HSD17B12Q53GQ0 312 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 AWAT1Q58HT5 328 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 PRAMEF5Q5TYX0 476 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 GLT8D1Q68CQ7 371 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 DHRS7BQ6IAN0 325 aaPredicted RBP5.34□□□□□ -1.55
TRAF4-213ENST00000578917 Q6P435 159 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 BRICD5Q6PL45 260 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 ASCL4Q6XD76 172 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 PRSS48Q7RTY5 328 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 LDLRAD3Q86YD5 345 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 CDH26Q8IXH8 852 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 ABHD12Q8N2K0 398 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 NKAIN3Q8N8D7 197 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 SUMF2Q8NBJ7 301 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 BEND2Q8NDZ0 799 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 OR51T1Q8NGJ9 327 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 RPS4Y2Q8TD47 263 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 CAPSLQ8WWF8 208 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 SGCDQ92629 289 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 TAF15Q92804 592 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRAF4-213ENST00000578917 FOXRED1Q96CU9 486 aaPredicted RBP5.34□□□□□ -1.55
TRAF4-213ENST00000578917 MALSU1Q96EH3 234 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 PGLYRP3Q96LB9 341 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 MGLLQ99685 303 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 CLEC7AQ9BXN2 247 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 SELENOIQ9C0D9 397 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 CST11Q9H112 138 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 TMEM133Q9H2Q1 129 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 BANF2Q9H503 90 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 TAS2R3Q9NYW6 316 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 KIF25Q9UIL4 384 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 VPREB3Q9UKI3 123 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 HILPDAQ9Y5L2 63 aa5.34□□□□□ -1.55
TRAF4-213ENST00000578917 DOCK11Q5JSL3 2073 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 IGHV2-26A0A0B4J1V2 119 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 TRAV24A0A0B4J272 114 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 KBTBD11-OT1A0A1B0GTJ5 212 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 A0A1B0GUS0 222 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 TMEM30CPA0ZSE6 113 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 FAM172BPA6NC97 362 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF729A6NN14 1252 aaPredicted RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 F2RL2O00254 374 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PEX14O75381 377 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ARL6IP5O75915 188 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CSN2P05814 226 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 FSTP19883 344 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 GZMHP20718 246 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 MDKP21741 143 aaPredicted RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PSMA1P25786 263 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CEACAM3P40198 252 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 KCNJ3P48549 501 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RAB13P51153 203 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 DLX6P56179 175 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RBM11P57052 281 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RPL15P61313 204 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 INSL4Q14641 139 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 TUSC1Q2TAM9 212 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ARSJQ5FYB0 599 aaPredicted RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ASPHD2Q6ICH7 369 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 HCP5Q6MZN7 132 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CRIP3Q6Q6R5 217 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 SHISA2Q6UWI4 295 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 HEPN1Q6WQI6 88 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 LHFPL4Q7Z7J7 247 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 LINC00596Q86U02 117 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 C11orf42Q8N5U0 333 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 DTX3Q8N9I9 347 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 OR11H6Q8NGC7 330 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RFESDQ8TAC1 157 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF596Q8TC21 504 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 MRGPRDQ8TDS7 321 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CCDC107Q8WV48 283 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 C17orf50Q8WW18 174 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PHYHIPQ92561 330 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CORO2AQ92828 525 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 FAM46BQ96A09 425 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 CREB3L1Q96BA8 519 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 MRPS24Q96EL2 167 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 NEDD4LQ96PU5 975 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 UQCC2Q9BRT2 126 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PPIL3Q9H2H8 161 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PLGRKTQ9HBL7 147 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 SPACA1Q9HBV2 294 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RAB18Q9NP72 206 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 IL36GQ9NZH8 169 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 C1RLQ9NZP8 487 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 ZNRD1Q9P1U0 126 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 TRAPPC2LQ9UL33 140 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 RRP15Q9Y3B9 282 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 TBL2Q9Y4P3 447 aaKnown RBP5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PEX16Q9Y5Y5 336 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 PKD1L1Q8TDX9 2849 aa5.33□□□□□ -1.56
TRAF4-213ENST00000578917 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms