RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 OMGP23515 440 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 FOXL1Q12952 345 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 GPR50Q13585 617 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 TBCEQ15813 527 aaPredicted RBP15.88■□□□□ 0.13
SS18-209ENST00000578595 PLA1AQ53H76 456 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 GLT8D1Q68CQ7 371 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 ZNF367Q7RTV3 350 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 C3orf56Q8N813 242 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 OR4D6Q8NGJ1 314 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 C17orf50Q8WW18 174 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 COQ2Q96H96 371 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 DPCDQ9BVM2 203 aaPredicted RBP15.88■□□□□ 0.13
SS18-209ENST00000578595 BARHL1Q9BZE3 327 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 SESN1Q9Y6P5 492 aa15.88■□□□□ 0.13
SS18-209ENST00000578595 TRAV24A0A0B4J272 114 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 CDK2P24941 298 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 PAX6P26367 422 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 IER3P46695 156 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 GABARAPL2P60520 117 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 TRAM1Q15629 374 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 TAF9Q16594 264 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 AWAT1Q58HT5 328 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 LINC00596Q86U02 117 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 SVOPQ8N4V2 548 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 SUMF2Q8NBJ7 301 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 NDNFQ8TB73 568 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 FAM46BQ96A09 425 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 BANF2Q9H503 90 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 ISYNA1Q9NPH2 558 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 OR6C3Q9NZP0 311 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 ZNF581Q9P0T4 197 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 KIF25Q9UIL4 384 aa15.87■□□□□ 0.13
SS18-209ENST00000578595 H3BUX3 64 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 CPEP16870 476 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 PSMA1P25786 263 aaKnown RBP15.86■□□□□ 0.13
SS18-209ENST00000578595 TPBGQ13641 420 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 LY6EQ16553 131 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 UNQ9370/PRO34162Q6UXP9 181 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 LHFPL4Q7Z7J7 247 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 CDH26Q8IXH8 852 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 PLPPR1Q8TBJ4 325 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 CLEC7AQ9BXN2 247 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 SELENOIQ9C0D9 397 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 TMEM133Q9H2Q1 129 aa15.86■□□□□ 0.13
SS18-209ENST00000578595 DENRO43583 198 aaKnown RBP15.85■□□□□ 0.13
SS18-209ENST00000578595 GPR137BO60478 399 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 ARL6IP5O75915 188 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 MGMTP16455 207 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 SRMP19623 302 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 NFYBP25208 207 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 LTC4SQ16873 150 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 MPV17LQ2QL34 196 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 LRRC75BQ2VPJ9 315 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 NHLRC3Q5JS37 347 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 BEND2Q8NDZ0 799 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 Q8NFD4 153 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 MRGPRDQ8TDS7 321 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 PHYHIPQ92561 330 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 DYRK2Q92630 601 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 FOXRED1Q96CU9 486 aaPredicted RBP15.85■□□□□ 0.13
SS18-209ENST00000578595 SSX3Q99909 188 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 UQCC2Q9BRT2 126 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 CST11Q9H112 138 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 ACOT13Q9NPJ3 140 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 TAS2R3Q9NYW6 316 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 VPREB3Q9UKI3 123 aa15.85■□□□□ 0.13
SS18-209ENST00000578595 IGHV2-26A0A0B4J1V2 119 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 ZNF729A6NN14 1252 aaPredicted RBP15.84■□□□□ 0.13
SS18-209ENST00000578595 MMP23AO75900 390 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 UCHL1P09936 223 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
SS18-209ENST00000578595 KCNJ3P48549 501 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 FAM189A2Q15884 450 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 DHRS7BQ6IAN0 325 aaPredicted RBP15.84■□□□□ 0.13
SS18-209ENST00000578595 OR52W1Q6IF63 320 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 BRICD5Q6PL45 260 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 GDPGP1Q6ZNW5 385 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 LRRTM1Q86UE6 522 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 OR13A1Q8NGR1 328 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 OR5R1Q8NH85 324 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 PLGRKTQ9HBL7 147 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 ABCB10Q9NRK6 738 aa15.84■□□□□ 0.13
SS18-209ENST00000578595 TBL2Q9Y4P3 447 aaKnown RBP15.84■□□□□ 0.13
SS18-209ENST00000578595 TRAV39A0A0B4J263 110 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 MPIG6BO95866 241 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 PSMB9P28065 219 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 GABRA5P31644 462 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 RAG2P55895 527 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 EMX1Q04741 257 aaPredicted RBP15.83■□□□□ 0.12
SS18-209ENST00000578595 SSX2Q16385 188 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 RSBN1Q5VWQ0 802 aaPredicted RBP15.83■□□□□ 0.12
SS18-209ENST00000578595 ZNF626Q68DY1 528 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 BAIAP2L2Q6UXY1 529 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 HEPN1Q6WQI6 88 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 ZNF565Q8N9K5 539 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 CORO2AQ92828 525 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 MRPS24Q96EL2 167 aaKnown RBP15.83■□□□□ 0.12
SS18-209ENST00000578595 SPACA1Q9HBV2 294 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 CALYQ9NYX4 217 aa15.83■□□□□ 0.12
SS18-209ENST00000578595 TMEM30CPA0ZSE6 113 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms