RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	OR4F5	Q8NH21	305 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	C17orf50	Q8WW18	174 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MRPS24	Q96EL2	167 aa	Known RBP	11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	COQ2	Q96H96	371 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	NR1H4	Q96RI1	486 aa	Predicted RBP	11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	UQCC2	Q9BRT2	126 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GAL3ST2	Q9H3Q3	398 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ISYNA1	Q9NPH2	558 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	OR6C3	Q9NZP0	311 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	C1RL	Q9NZP8	487 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ST3GAL6	Q9Y274	331 aa		11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TBL2	Q9Y4P3	447 aa	Known RBP	11.08	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MEX3A	A1L020	520 aa	Known RBP	11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	VGLL3	A8MV65	326 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SC5D	O75845	299 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GTF2F2	P13984	249 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	VHL	P40337	213 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TPBG	Q13641	420 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MPV17L	Q2QL34	196 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	PIGY	Q3MUY2	71 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ACSM3	Q53FZ2	586 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	PAN3	Q58A45	887 aa	Known RBP	11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	OR52W1	Q6IF63	320 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	HEPN1	Q6WQI6	88 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TRAPPC6B	Q86SZ2	158 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	PHYHIP	Q92561	330 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	UFD1	Q92890	307 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MALSU1	Q96EH3	234 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CNBD2	Q96M20	576 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	NKX3-1	Q99801	234 aa	Predicted RBP	11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SSX3	Q99909	188 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	BARHL1	Q9BZE3	327 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TMEM133	Q9H2Q1	129 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	BLOC1S6	Q9UL45	172 aa		11.07	□□□□□ -0.64
CSNK1D-208	ENST00000578501	IGHV2-26	A0A0B4J1V2	119 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ZNF729	A6NN14	1252 aa	Predicted RBP	11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MAS1	P04201	325 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ARG1	P05089	322 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SERPINA2	P20848	420 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	RAG2	P55895	527 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	RELB	Q01201	579 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TRAM1	Q15629	374 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	LRRC75B	Q2VPJ9	315 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SLC22A6	Q4U2R8	563 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MINOS1	Q5TGZ0	78 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	RTN4RL2	Q86UN3	420 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	JAGN1	Q8N5M9	183 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	ZNF565	Q8N9K5	539 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TMED9	Q9BVK6	235 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CLEC7A	Q9BXN2	247 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	LINC00574	Q9H8X3	128 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	BEX1	Q9HBH7	125 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GHRL	Q9UBU3	117 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MINOS1-NBL1	R4GNA1	71 aa		11.06	□□□□□ -0.64
CSNK1D-208	ENST00000578501		A0A087X0M5	115 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501		A0A1B0GX30	115 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GEMIN2	O14893	280 aa	Known RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MMP23A	O75900	390 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	OR7C1	O76099	320 aa	Predicted RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CGB3	P0DN86	165 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CGB7	P0DN87	165 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CPE	P16870	476 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MDK	P21741	143 aa	Predicted RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	OMG	P23515	440 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CD34	P28906	385 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GP2	P55259	537 aa	Known RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MLLT11	Q13015	90 aa	Predicted RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	LIPK	Q5VXJ0	399 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	GLIPR1L1	Q6UWM5	242 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SUMF2	Q8NBJ7	301 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	OR4D6	Q8NGJ1	314 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TAF15	Q92804	592 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MUL1	Q969V5	352 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	DPCD	Q9BVM2	203 aa	Predicted RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CCDC90B	Q9GZT6	254 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SLITRK2	Q9H156	845 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	PPIL3	Q9H2H8	161 aa	Known RBP	11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TCF7L1	Q9HCS4	588 aa		11.05	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MEIKIN	A0A087WXM9	373 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CLPSL1	A2RUU4	121 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501		H3BUX3	64 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	HSPB6	O14558	160 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	MRPS14	O60783	128 aa	Known RBP	11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	UCHL1	P09936	223 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	HSMCR30	P0CW71	290 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CD37	P11049	281 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	SRM	P19623	302 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	CDK2	P24941	298 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	PSMA1	P25786	263 aa	Known RBP	11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	DYNLT3	P51808	116 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	DYNC1I2	Q13409	638 aa	Known RBP	11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	INSL4	Q14641	139 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	TBCE	Q15813	527 aa	Predicted RBP	11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	C17orf58	Q2M2W7	97 aa		11.04	□□□□□ -0.64
CSNK1D-208	ENST00000578501	LDLRAD2	Q5SZI1	272 aa		11.04	□□□□□ -0.64

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