RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ROM1Q03395 351 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 MAFAQ8NHW3 353 aaPredicted RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 ADIPOR1Q96A54 375 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 MRGPRFQ96AM1 343 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 MRPS24Q96EL2 167 aaKnown RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 SAT2Q96F10 170 aaPredicted RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 DECR2Q9NUI1 292 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 RYDENQ9NUL5 291 aaKnown RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 MTCL1Q9Y4B5 1905 aaKnown RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 SULT1A1P50225 295 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 P2RY4P51582 365 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 GAS1P54826 345 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 DHODHQ02127 395 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 SLC38A11Q08AI6 406 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 TPRX1Q8N7U7 411 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 C15orf54Q8N8G6 183 aa10.53□□□□□ -0.72
ERBB2-206ENST00000578373 DUSP15Q9H1R2 295 aaPredicted RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
ERBB2-206ENST00000578373 GDF9O60383 454 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 HES1Q14469 280 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 OR2Z1Q8NG97 314 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 FAM210BQ96KR6 192 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 KCNK17Q96T54 332 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.72
ERBB2-206ENST00000578373 ZNF391Q9UJN7 358 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 HSF4Q9ULV5 492 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 FANCMQ8IYD8 2048 aa10.52□□□□□ -0.72
ERBB2-206ENST00000578373 MSGN1A6NI15 193 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 CEBPEQ15744 281 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 MYPOPQ86VE0 399 aaPredicted RBP10.52□□□□□ -0.73
ERBB2-206ENST00000578373 KLHDC3Q9BQ90 382 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 CHST5Q9GZS9 411 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 OR2D2Q9H210 308 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 NGBQ9NPG2 151 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 PIPOXQ9P0Z9 390 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 MIOXQ9UGB7 285 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 SCN5AQ14524 2016 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 MPTX1A8MV57 137 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 G3V3Q6 166 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 YIF1AO95070 293 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 TIAF1O95411 115 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
ERBB2-206ENST00000578373 ATP6V0CP27449 155 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 MAGEA5P43359 124 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 LSM6P62312 80 aaKnown RBP10.52□□□□□ -0.73
ERBB2-206ENST00000578373 EWSR1Q01844 656 aaKnown RBP eCLIP10.52□□□□□ -0.73
ERBB2-206ENST00000578373 C1QL2Q7Z5L3 287 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 SNX22Q96L94 193 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 HIF1ANQ9NWT6 349 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 GPR132Q9UNW8 380 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 PSME4Q14997 1843 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 PGA3P0DJD8 388 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 NOVA1P51513 510 aaKnown RBP10.52□□□□□ -0.73
ERBB2-206ENST00000578373 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 HIKESHIQ53FT3 197 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 OR2Y1Q8NGV0 311 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 ZDHHC11Q9H8X9 412 aa10.52□□□□□ -0.73
ERBB2-206ENST00000578373 TRGV5A0A0B4J1U4 118 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 CLDN34H7C241 214 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 IL2RAP01589 272 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 MMP9P14780 707 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 SRD5A2P31213 254 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 IL11RAQ14626 422 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 HOGA1Q86XE5 327 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 LDLRAD3Q86YD5 345 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 DHRS7CA6NNS2 312 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 OR2A4O95047 310 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 OR10J4P0C629 311 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 ZNF17P17021 662 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 GNG10P50151 68 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 RBPJQ06330 500 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 ZNF718Q3SXZ3 478 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 ACSM6Q6P461 480 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 APCDD1LQ8NCL9 501 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 OR2A7Q96R45 310 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 S1PR3Q99500 378 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 G0S2P27469 103 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 GNB1P62873 340 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 ZNF92Q03936 586 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 CXorf66Q5JRM2 361 aaPredicted RBP10.51□□□□□ -0.73
ERBB2-206ENST00000578373 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.51□□□□□ -0.73
ERBB2-206ENST00000578373 FAM173AQ9BQD7 235 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 SLC26A1Q9H2B4 701 aa10.51□□□□□ -0.73
ERBB2-206ENST00000578373 F6UZH7 168 aa10.5□□□□□ -0.73
ERBB2-206ENST00000578373 CLN5O75503 358 aa10.5□□□□□ -0.73
ERBB2-206ENST00000578373 HPP00738 406 aa10.5□□□□□ -0.73
ERBB2-206ENST00000578373 DEFA4P12838 97 aa10.5□□□□□ -0.73
ERBB2-206ENST00000578373 DTYMKP23919 212 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms