RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 HMG20AQ9NP66 347 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 NOTCH1P46531 2555 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 TCRBV3S1A0A5B6 114 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 BUB1B-PAK6H3BSN5 160 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 ATF1P18846 271 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 GABRR1P24046 479 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 KCNJ3P48549 501 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 THBS3P49746 956 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 PTGES3Q15185 160 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 DNAL1Q4LDG9 190 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 SLC25A26Q70HW3 274 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 TRAPPC6BQ86SZ2 158 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 ANGPTL5Q86XS5 388 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 STX12Q86Y82 276 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 OR8H3Q8N146 312 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 YIPF7Q8N8F6 280 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 OR52N4Q8NGI2 321 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 OR9G1Q8NH87 305 aa8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 SIRT4Q9Y6E7 314 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-214ENST00000578112 ZAR1LA6NP61 321 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 FKBP6O75344 327 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 HTR1FP30939 366 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 POU3F4P49335 361 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 KRTAP10-11P60412 298 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 ISL1P61371 349 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 RIPK1Q13546 671 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 EDDM3AQ14507 147 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 Q6ZS46 218 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 FAM220AQ7Z4H9 259 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 CPNE2Q96FN4 548 aaPredicted RBP8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 MBOAT4Q96T53 435 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 GHITMQ9H3K2 345 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 IGKV1-27A0A075B6S5 117 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 C3orf84H3BNL1 204 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 PRKYO43930 277 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 PAX6P26367 422 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 KLHL22Q53GT1 634 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 ETV3LQ6ZN32 361 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 MRPL41Q8IXM3 137 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 TRMT10AQ8TBZ6 339 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 CHCHD6Q9BRQ6 235 aa8.93□□□□□ -0.98
SMARCE1-214ENST00000578112 WI2-2373I1.2A0A1W2PRP0 233 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 AMY1AP04745 511 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 AMY2AP04746 511 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 PCP4P48539 62 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 CCR9P51686 369 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 GNGT1P63211 74 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 LSAMPQ13449 338 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 COTL1Q14019 142 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 ABCA11PQ4W5N1 156 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 RFKQ969G6 155 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 UTP4Q969X6 686 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 MRPL48Q96GC5 212 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 VCXQ9H320 206 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 A0A1W2PRX2 142 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 ODAMA1E959 279 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 PSPNO60542 156 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 GLAP06280 429 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 LPLP06858 475 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 PDZK1IP1Q13113 114 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 DEFB121Q5J5C9 76 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 TMEM236Q5W0B7 351 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 FOXRED2Q8IWF2 684 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 HAVCR2Q8TDQ0 301 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 P2RX4Q99571 388 aa8.92□□□□□ -0.98
SMARCE1-214ENST00000578112 L7N2F9 121 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 ATP5HO75947 161 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 IGHA1P01876 353 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 CDK2P24941 298 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 MTNR1BP49286 362 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 DAPP51397 102 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 EBI3Q14213 229 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 C8orf31Q8N9H6 132 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 OPALINQ96PE5 141 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 ZNF286AQ9HBT8 521 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 LOC107986453A0A1B0GWG9 222 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 F8VVB4 439 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 F8VWA3 439 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 OR2H2O95918 312 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 IGHG2P01859 326 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 ZNF20P17024 532 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 BCL3P20749 454 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 MTCP1P56278 107 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 FLOT2Q14254 428 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 IL13RA2Q14627 380 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 TMEM30BQ3MIR4 351 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 C9orf66Q5T8R8 295 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 PRAMEF5Q5TYX0 476 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 TCEANCQ8N8B7 351 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 CCDC197Q8NCU1 140 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 TOMM40LQ969M1 308 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 RPEQ96AT9 228 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 OR5M11Q96RB7 305 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 BCL7BQ9BQE9 202 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 ZNF649Q9BS31 505 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 TAS2R1Q9NYW7 299 aa8.91□□□□□ -0.98
SMARCE1-214ENST00000578112 KBTBD11-OT1A0A1B0GTJ5 212 aa8.9□□□□□ -0.98
SMARCE1-214ENST00000578112 APOL3O95236 402 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms