RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 AWAT1Q58HT5 328 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 C3orf56Q8N813 242 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 OR11H6Q8NGC7 330 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 OR5R1Q8NH85 324 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 MRPS24Q96EL2 167 aaKnown RBP19.12■□□□□ 0.65
SNF8-217ENST00000576353 MGLLQ99685 303 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 NCOR1P1Q9H4R4 102 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 ING3Q9NXR8 418 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 OR6C3Q9NZP0 311 aa19.12■□□□□ 0.65
SNF8-217ENST00000576353 SC5DO75845 299 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 OR7C1O76099 320 aaPredicted RBP19.11■□□□□ 0.65
SNF8-217ENST00000576353 PSMA1P25786 263 aaKnown RBP19.11■□□□□ 0.65
SNF8-217ENST00000576353 MAP2K4P45985 399 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 TBCEQ15813 527 aaPredicted RBP19.11■□□□□ 0.65
SNF8-217ENST00000576353 MPV17LQ2QL34 196 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 HSD17B12Q53GQ0 312 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 AWAT2Q6E213 333 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 OR52W1Q6IF63 320 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 LYPD6Q86Y78 171 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 ZNF565Q8N9K5 539 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 TMEM203Q969S6 136 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 FOXRED1Q96CU9 486 aaPredicted RBP19.11■□□□□ 0.65
SNF8-217ENST00000576353 MEGF9Q9H1U4 602 aa19.11■□□□□ 0.65
SNF8-217ENST00000576353 GEMIN2O14893 280 aaKnown RBP19.1■□□□□ 0.65
SNF8-217ENST00000576353 MRPS14O60783 128 aaKnown RBP19.1■□□□□ 0.65
SNF8-217ENST00000576353 ARG1P05089 322 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 CPEP16870 476 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 SRMP19623 302 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 FAM27D1Q5T7N8 215 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 ZNF626Q68DY1 528 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 HEPN1Q6WQI6 88 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 SUMF2Q8NBJ7 301 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 C17orf50Q8WW18 174 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 AJUBAQ96IF1 538 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 DPCDQ9BVM2 203 aaPredicted RBP19.1■□□□□ 0.65
SNF8-217ENST00000576353 SLITRK2Q9H156 845 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 TMEM133Q9H2Q1 129 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 GHRLQ9UBU3 117 aa19.1■□□□□ 0.65
SNF8-217ENST00000576353 TBL2Q9Y4P3 447 aaKnown RBP19.1■□□□□ 0.65
SNF8-217ENST00000576353 MEIKINA0A087WXM9 373 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 ODF3BA8MYP8 253 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 GPR137BO60478 399 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 UCHL1P09936 223 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 GP2P55259 537 aaKnown RBP19.09■□□□□ 0.65
SNF8-217ENST00000576353 GABARAPL2P60520 117 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 PAX5Q02548 391 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 DYNC1I2Q13409 638 aaKnown RBP19.09■□□□□ 0.65
SNF8-217ENST00000576353 TAF9Q16594 264 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 AANATQ16613 207 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 GLT8D1Q68CQ7 371 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 GDPGP1Q6ZNW5 385 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 ZNF367Q7RTV3 350 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 OR4D6Q8NGJ1 314 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 PPIL3Q9H2H8 161 aaKnown RBP19.09■□□□□ 0.65
SNF8-217ENST00000576353 SPACA1Q9HBV2 294 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 VPREB3Q9UKI3 123 aa19.09■□□□□ 0.65
SNF8-217ENST00000576353 FAM90A8PA6NJQ4 464 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 ZNF729A6NN14 1252 aaPredicted RBP19.08■□□□□ 0.64
SNF8-217ENST00000576353 HAX1O00165 279 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 CDK2P24941 298 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 LRRTM1Q86UE6 522 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 MALSU1Q96EH3 234 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 SSX3Q99909 188 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 CLEC7AQ9BXN2 247 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 YTHDF1Q9BYJ9 559 aaKnown RBP19.08■□□□□ 0.64
SNF8-217ENST00000576353 KIF25Q9UIL4 384 aa19.08■□□□□ 0.64
SNF8-217ENST00000576353 IGHV2-26A0A0B4J1V2 119 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 A0A1W2PP11 408 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 MMP23AO75900 390 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 CFPP27918 469 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 RPS25P62851 125 aaKnown RBP19.07■□□□□ 0.64
SNF8-217ENST00000576353 LRRC75BQ2VPJ9 315 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 ATAD3CQ5T2N8 411 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 PRAMEF5Q5TYX0 476 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 RSBN1Q5VWQ0 802 aaPredicted RBP19.07■□□□□ 0.64
SNF8-217ENST00000576353 RTN4RL2Q86UN3 420 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 OR4F5Q8NH21 305 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 ACOT13Q9NPJ3 140 aa19.07■□□□□ 0.64
SNF8-217ENST00000576353 KBTBD11-OT1A0A1B0GTJ5 212 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 A0A1B0GUS0 222 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 POM121CA8CG34 1229 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 CRTAPO75718 401 aaPredicted RBP19.06■□□□□ 0.64
SNF8-217ENST00000576353 ARL6IP5O75915 188 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 NDUFA7O95182 113 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 UBBP0CG47 229 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 TMEM91Q6ZNR0 172 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 LHFPL4Q7Z7J7 247 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 ABHD12Q8N2K0 398 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 SVOPQ8N4V2 548 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 PLPPR1Q8TBJ4 325 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 CST11Q9H112 138 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 C1RLQ9NZP8 487 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 ZNF581Q9P0T4 197 aa19.06■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A10PA6NDY2 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A18PA6NE21 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A16PA6NEW6 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A20PA6NIJ5 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A7PA6NKC0 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A22PA8MWA6 464 aa19.05■□□□□ 0.64
SNF8-217ENST00000576353 FAM90A12PA8MX19 464 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms