RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 KLHL13Q9P2N7 655 aa8.36□□□□□ -1.07
CCDC40-212ENST00000574799 PRSS50Q9UI38 385 aa8.36□□□□□ -1.07
CCDC40-212ENST00000574799 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ANGPTL7O43827 346 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 HPRT1P00492 218 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF506Q5JVG8 444 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 PHF7Q9BWX1 381 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 FOXJ2Q9P0K8 574 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ANXA10Q9UJ72 324 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TUBD1Q9UJT1 453 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 DDAH2O95865 285 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ISG15P05161 165 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 DBHP09172 617 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 CHRNA7P36544 502 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 FASLGP48023 281 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TNFSF10P50591 281 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 MTCP1P56278 107 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 HHEXQ03014 270 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ENDOGQ14249 297 aaKnown RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 MAML2Q8IZL2 1156 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 BATF2Q8N1L9 274 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TMEM252Q8N6L7 170 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 THAP3Q8WTV1 239 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 LIN37Q96GY3 246 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF160Q9HCG1 818 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 MSL2Q9HCI7 577 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 IGHV5-51A0A0C4DH38 117 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 KIR2DS5A0A0G2JLQ3 304 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 A0A0G2JNG1 304 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 KIR2DS3K7RE56 304 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 CTSEP14091 401 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 CFPP27918 469 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 S100GP29377 79 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 MAS1LP35410 378 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 GFERP55789 205 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 FOXK1P85037 733 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 UBE2ZQ9H832 354 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
CCDC40-212ENST00000574799 TRIOBPQ9H2D6 2365 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 A0A1W2PR80 420 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 BGLAPP02818 100 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 BCL2P10415 239 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 IRF2P14316 349 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
CCDC40-212ENST00000574799 CDAP32320 146 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 ARL4DP49703 201 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 SHBQ15464 509 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 COL5A1-AS1Q5SY13 56 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 DPPA3Q6W0C5 159 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 BAGE2Q86Y30 109 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 HLA-CQ95604 372 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 CTDSP1Q9GZU7 261 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 ASCL3Q9NQ33 180 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 ADAM20O43506 726 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 FAHP16930 419 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 CNN1P51911 297 aaKnown RBP8.34□□□□□ -1.07
CCDC40-212ENST00000574799 TRA2AQ13595 282 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCDC40-212ENST00000574799 PDCD1Q15116 288 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF774Q6NX45 483 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 LHFPL1Q86WI0 220 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 OR4F5Q8NH21 305 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 CLDND2Q8NHS1 167 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 VN1R17PQ8TDU5 208 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 BTF3L4Q96K17 158 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 FAM103A1Q9BTL3 118 aaKnown RBP8.34□□□□□ -1.07
CCDC40-212ENST00000574799 Q9N2K0 584 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 P4HTMQ9NXG6 502 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 RP1P56715 2156 aa8.34□□□□□ -1.07
CCDC40-212ENST00000574799 A0A1B0GU03 582 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF43P17038 809 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 CD33P20138 364 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 GABREP78334 506 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 IL15RAQ13261 267 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 DEGS2Q6QHC5 323 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF321PQ8N8H1 164 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 POC1BQ8TC44 478 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM234Q8WY98 164 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 C22orf15Q8WYQ4 148 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 BOD1Q96IK1 185 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 TP53RKQ96S44 253 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 DIRC2Q96SL1 478 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 RYDENQ9NUL5 291 aaKnown RBP8.34□□□□□ -1.08
CCDC40-212ENST00000574799 COPS7AQ9UBW8 275 aa8.34□□□□□ -1.08
CCDC40-212ENST00000574799 IGKV1D-8A0A087WSZ0 117 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 IGSF23A1L1A6 192 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 H0YIG0 161 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 K7ESF4 209 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 IFI6P09912 130 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CAPZBP47756 277 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms