RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 OR10J5Q8NHC4 309 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 MOB3AQ96BX8 217 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 DDIT4LQ96D03 193 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 R3HDM4Q96D70 268 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 TPSD1Q9BZJ3 242 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 VAX2Q9UIW0 290 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
SMG6-215ENST00000574501 NPIPB13A6NJU9 1138 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 NPIPB4C9JG80 1138 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 PPP5D1E7EU14 171 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 ETV2O00321 342 aaPredicted RBP12.47□□□□□ -0.41
SMG6-215ENST00000574501 DLEU1O43261 78 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 EFNA2O43921 213 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 DHRS3O75911 302 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 FBXW4P57775 412 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 RTP5Q14D33 572 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 IQCJQ1A5X6 159 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 SPIN3Q5JUX0 258 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 CCDC71LQ8N9Z2 235 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 FGF14Q92915 247 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 TMEM222Q9H0R3 208 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 P4HTMQ9NXG6 502 aa12.47□□□□□ -0.41
SMG6-215ENST00000574501 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 OR2J2O76002 312 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 CEACAM1P13688 526 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 PLA2G5P39877 138 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 GFERP55789 205 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 MYBPHQ13203 477 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 COA6Q5JTJ3 125 aaKnown RBP12.46□□□□□ -0.41
SMG6-215ENST00000574501 H1FOOQ8IZA3 346 aaPredicted RBP12.46□□□□□ -0.41
SMG6-215ENST00000574501 TMEM18Q96B42 140 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 ATP5SQ99766 215 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
SMG6-215ENST00000574501 KIAA2026Q5HYC2 2103 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 IGHV5-51A0A0C4DH38 117 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 A0A1W2PNR3 127 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 DTYMKP23919 212 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.42
SMG6-215ENST00000574501 TBC1D26Q86UD7 250 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 MAML2Q8IZL2 1156 aaPredicted RBP12.46□□□□□ -0.42
SMG6-215ENST00000574501 BATF2Q8N1L9 274 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 SEMA5BQ9P283 1151 aa12.46□□□□□ -0.42
SMG6-215ENST00000574501 POLR3KQ9Y2Y1 108 aaPredicted RBP12.46□□□□□ -0.42
SMG6-215ENST00000574501 ASCC3Q8N3C0 2202 aaKnown RBP12.46□□□□□ -0.42
SMG6-215ENST00000574501 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
SMG6-215ENST00000574501 IGKV3D-11A0A0A0MRZ8 115 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 VSTM2BA6NLU5 285 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 GALR1P47211 349 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 GRB2P62993 217 aaKnown RBP12.45□□□□□ -0.42
SMG6-215ENST00000574501 TMEM267Q0VDI3 215 aaPredicted RBP12.45□□□□□ -0.42
SMG6-215ENST00000574501 DCAF10Q5QP82 559 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 Q6ZPA2 131 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 SHISA6Q6ZSJ9 500 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
SMG6-215ENST00000574501 SMIM7Q9BQ49 75 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 RBKSQ9H477 322 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 V9GYS6 101 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 IGHV3-20A0A0C4DH32 117 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 PPYP01298 95 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 CST2P09228 141 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 GNRHRP30968 328 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 WNT5AP41221 380 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 SLC25A47Q6Q0C1 308 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 OR51G1Q8NGK1 321 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 SIGLEC12Q96PQ1 595 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 ZNF286AQ9HBT8 521 aa12.45□□□□□ -0.42
SMG6-215ENST00000574501 ATG2AQ2TAZ0 1938 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 TRIOO75962 3097 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 IGKV1-27A0A075B6S5 117 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 TRAV1-1A0A0B4J248 108 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 ANKUB1A6NFN9 424 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 CTHP32929 405 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 PDLIM4P50479 330 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 HNF4GQ14541 408 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 EXT1Q16394 746 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 ST8SIA1Q92185 356 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 FKBP11Q9NYL4 201 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
SMG6-215ENST00000574501 A0A1B0GUS0 222 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 B4E171 279 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 IGLV3-1P01715 115 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 TSPAN7P41732 249 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 OR3A1P47881 315 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 PAX9P55771 341 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 BAXQ07812 192 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms