RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SH2D7A6NKC9 451 aaPredicted RBP16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 PIN1P1O15428 100 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 MAGEB3O15480 346 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 OR2F2O95006 317 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 ALX3O95076 343 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 PF4V1P10720 104 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 RAB3AP20336 220 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 SOX2P48431 317 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 C17orf58Q2M2W7 97 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 UTF1Q5T230 341 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 CCDC144NLQ6NUI1 221 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 TNFAIP8L1Q8WVP5 186 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 RBM14Q96PK6 669 aaKnown RBP16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 SLC29A1Q99808 456 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 KIF25Q9UIL4 384 aa16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 RPL36Q9Y3U8 105 aaKnown RBP16.88■□□□□ 0.29
CHRNB1-206ENST00000574054 TCRBV4S1A1TA0A5B7 111 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 IGHV3-7P01780 117 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 CD33P20138 364 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 MNDAP41218 407 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 CD83Q01151 205 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 RSU1Q15404 277 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 C9orf152Q5JTZ5 239 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 C10orf67Q8IYJ2 551 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 OR51T1Q8NGJ9 327 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 OR10K1Q8NGX5 313 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 KIRREL1Q96J84 757 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 ZNF649Q9BS31 505 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 TAS2R4Q9NYW5 299 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 CALYQ9NYX4 217 aa16.87■□□□□ 0.29
CHRNB1-206ENST00000574054 TRAV24A0A0B4J272 114 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 LOC100130705A0A1B0GUX0 176 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 LY6LH3BQJ8 138 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 GABRPO00591 440 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 GTF2A1P52655 376 aaPredicted RBP16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 LTC4SQ16873 150 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 PIGYQ3MUY2 71 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 KHDC1LQ5JSQ8 128 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 ELP2Q6IA86 826 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 ZNF565Q8N9K5 539 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 PXT1Q8NFP0 134 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 OR51A2Q8NGJ7 313 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 OR13A1Q8NGR1 328 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 CNIH3Q8TBE1 160 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 MRAPQ8TCY5 172 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 LEAP2Q969E1 77 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 TOMM40LQ969M1 308 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 RPEQ96AT9 228 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 PHF21AQ96BD5 680 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 NECAP2Q9NVZ3 263 aa16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 AMMECR1Q9Y4X0 333 aaPredicted RBP16.86■□□□□ 0.29
CHRNB1-206ENST00000574054 A0A087X0M5 115 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 A0A1B0GX30 115 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 OOSP1A8MZH6 123 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 IL13RA2Q14627 380 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 KLHL22Q53GT1 634 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 OR9G1Q8NH87 305 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 HAVCR2Q8TDQ0 301 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 RGP1Q92546 391 aaPredicted RBP16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 JAM3Q9BX67 310 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 BARHL1Q9BZE3 327 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 S100A14Q9HCY8 104 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 FAM118AQ9NWS6 357 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 IDI2-AS1Q9NZ38 188 aa16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 TSSC4Q9Y5U2 329 aaPredicted RBP16.85■□□□□ 0.29
CHRNB1-206ENST00000574054 M0QZK8 103 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 PF4P02776 101 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 FAM106CPP0CH98 169 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 LIMS3P0CW19 117 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 LIMS4P0CW20 117 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 IGLL1P15814 213 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 C21orf33P30042 268 aaPredicted RBP16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 TCTEX1D4Q5JR98 221 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 OR4X2Q8NGF9 303 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 RFESDQ8TAC1 157 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 MRGPRDQ8TDS7 321 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 GPR148Q8TDV2 347 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 APH1BQ8WW43 257 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 MYDGFQ969H8 173 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 PCDHB16Q9NRJ7 776 aa16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 MRPS18AQ9NVS2 196 aaKnown RBP16.84■□□□□ 0.29
CHRNB1-206ENST00000574054 HTR3BO95264 441 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 IL1AP01583 271 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 AMY1AP04745 511 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 AMY2AP04746 511 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 CD2P06729 351 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 CGB3P0DN86 165 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 CGB7P0DN87 165 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 GNG10P50151 68 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 SMN1Q16637 294 aaKnown RBP16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 ZNF529Q6P280 563 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 C10orf99Q6UWK7 81 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 PQLC1Q8N2U9 271 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 PLPPR1Q8TBJ4 325 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 AURKAIP1Q9NWT8 199 aaPredicted RBP16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 MOB4Q9Y3A3 225 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 HSPE1-MOB4S4R3N1 261 aa16.83■□□□□ 0.28
CHRNB1-206ENST00000574054 TRAV39A0A0B4J263 110 aa16.82■□□□□ 0.28
CHRNB1-206ENST00000574054 J3QR06 171 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms