RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FAM172BPA6NC97 362 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 MAGEA13PA6NCF6 341 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 H0YJX3 145 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 GPX5O75715 221 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 HTR1DP28221 377 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 PTGFRP43088 359 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 BLCAPP62952 87 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 C2orf68Q2NKX9 166 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 PIGYQ3MUY2 71 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 NHLRC3Q5JS37 347 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
SMG6-214ENST00000573827 RSBN1Q5VWQ0 802 aaPredicted RBP13.97□□□□□ -0.17
SMG6-214ENST00000573827 TMPRSS11AQ6ZMR5 421 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 RTN4RL2Q86UN3 420 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 OR13A1Q8NGR1 328 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 PLPPR1Q8TBJ4 325 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 GHSRQ92847 366 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 TMEM80Q96HE8 168 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 KIRREL1Q96J84 757 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 IFT22Q9H7X7 185 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 PCDHGB5Q9Y5G0 923 aa13.97□□□□□ -0.17
SMG6-214ENST00000573827 TRBV5-7A0A0A0MS05 114 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 KBTBD11-OT1A0A1B0GTJ5 212 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 IRGMA1A4Y4 181 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 ZNF729A6NN14 1252 aaPredicted RBP13.96□□□□□ -0.17
SMG6-214ENST00000573827 CDRT1O95170 752 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 SLC34A1Q06495 639 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 HLA-DRB5Q30154 266 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
SMG6-214ENST00000573827 OR52W1Q6IF63 320 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 LYPD6Q86Y78 171 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 DHRSXQ8N5I4 330 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 C11orf44Q8N8P7 122 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 NDNFQ8TB73 568 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 TMEM138Q9NPI0 162 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 ABCB10Q9NRK6 738 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 KIF25Q9UIL4 384 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 HSPE1-MOB4S4R3N1 261 aa13.96□□□□□ -0.17
SMG6-214ENST00000573827 TRAV8-7A0A075B6U6 113 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 ADARB2-AS1A8MUL3 147 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 NPIPB11E5RHQ5 1161 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 F2RL2O00254 374 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 CD2P06729 351 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 ST3GAL4Q11206 333 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 PAN3Q58A45 887 aaKnown RBP13.95□□□□□ -0.18
SMG6-214ENST00000573827 Q6ZTK2 550 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 SATL1Q86VE3 508 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 ZFP41Q8N8Y5 198 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 SETD9Q8NE22 299 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 FAM110DQ8TAY7 271 aaPredicted RBP13.95□□□□□ -0.18
SMG6-214ENST00000573827 ZNF596Q8TC21 504 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 CPNE2Q96FN4 548 aaPredicted RBP13.95□□□□□ -0.18
SMG6-214ENST00000573827 NR1H4Q96RI1 486 aaPredicted RBP13.95□□□□□ -0.18
SMG6-214ENST00000573827 OCSTAMPQ9BR26 566 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 FKBP14Q9NWM8 211 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 ING3Q9NXR8 418 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 PSORS1C1Q9UIG5 152 aa13.95□□□□□ -0.18
SMG6-214ENST00000573827 PLXNB1O43157 2135 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 HSPB6O14558 160 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 XPNPEP2O43895 674 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 AMY1AP04745 511 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 AMY2AP04746 511 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 MYL12AP19105 171 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 CD24P25063 80 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 C21orf33P30042 268 aaPredicted RBP13.94□□□□□ -0.18
SMG6-214ENST00000573827 CAPGP40121 348 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 TMEM95Q3KNT9 176 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 DDI2Q5TDH0 399 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 GPER1Q99527 375 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 PLCXD1Q9NUJ7 323 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
SMG6-214ENST00000573827 CNOT2Q9NZN8 540 aaKnown RBP13.94□□□□□ -0.18
SMG6-214ENST00000573827 A0A1W2PP11 408 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 PIN1P1O15428 100 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 MAGEB3O15480 346 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 IL1AP01583 271 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 CSF1P09603 554 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 VSIG10L2P0DP72 767 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 CD28P10747 220 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 FSTP19883 344 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 BDKRB2P30411 391 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 ZNF93P35789 620 aaPredicted RBP13.93□□□□□ -0.18
SMG6-214ENST00000573827 KCNJ3P48549 501 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 RBM11P57052 281 aaKnown RBP13.93□□□□□ -0.18
SMG6-214ENST00000573827 RSU1Q15404 277 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 Q499Y3 187 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 YIF1BQ5BJH7 314 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 DTX3Q8N9I9 347 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 SUMF2Q8NBJ7 301 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 PRSS22Q9GZN4 317 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 ST3GAL6Q9Y274 331 aa13.93□□□□□ -0.18
SMG6-214ENST00000573827 MEIKINA0A087WXM9 373 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A18PA6NE21 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A16PA6NEW6 464 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms