RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 PRR7Q8TB68 274 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 LRRC29Q8WV35 223 aa24.58■■□□□ 1.52
CTDNEP1-208ENST00000573600 FAM172BPA6NC97 362 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 FAM90A27PA6NNH2 459 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 WNT9BO14905 357 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 SPRY3O43610 288 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 CTSDP07339 412 aaPredicted RBP24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 ADORA2A-AS1P86434 159 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 BAMBIQ13145 260 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 C11orf88Q6PI97 169 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 TMEM230Q96A57 120 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 CHIAQ9BZP6 476 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 PIPOXQ9P0Z9 390 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 OR14J1Q9UGF5 321 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 NDRG3Q9UGV2 375 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 MGAT4AQ9UM21 535 aa24.57■■□□□ 1.52
CTDNEP1-208ENST00000573600 FCGR2CP31995 323 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 LPCAT3Q6P1A2 487 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 PCSK4Q6UW60 755 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 MOB1BQ7L9L4 216 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 OR2T35Q8NGX2 323 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 CLEC4MQ9H2X3 399 aaPredicted RBP24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 IL19Q9UHD0 177 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 PCNX1Q96RV3 2341 aa24.56■■□□□ 1.52
CTDNEP1-208ENST00000573600 IFNL4K9M1U5 179 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 TNFSF4P23510 183 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 DNASE1P24855 282 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 GATA4P43694 442 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 C2orf68Q2NKX9 166 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 NCMAPQ5T1S8 102 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 FAM90A1Q86YD7 464 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 GAPTQ8N292 157 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 ZBTB8BQ8NAP8 495 aaPredicted RBP24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 LIME1Q9H400 295 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 SRRM5B3KS81 715 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 SFT2D2O95562 160 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 ZNF497Q6ZNH5 498 aa24.55■■□□□ 1.52
CTDNEP1-208ENST00000573600 CHD3Q12873 2000 aaKnown RBP24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 ZNF728P0DKX0 622 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 UCP3P55916 312 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 ADIPOQQ15848 244 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 ITLN1Q8WWA0 313 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 MOB3AQ96BX8 217 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 DIRC2Q96SL1 478 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 TMPRSS13Q9BYE2 586 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 FXYD6Q9H0Q3 95 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 SLC23A1Q9UHI7 598 aa24.54■■□□□ 1.52
CTDNEP1-208ENST00000573600 SPTA1P02549 2419 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 ATXN7O15265 892 aaPredicted RBP24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 TK1P04183 234 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 HLA-GP17693 338 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 PI3P19957 117 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 IGSF11Q5DX21 431 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 LIN54Q6MZP7 749 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 C20orf204Q6ZNR8 217 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 OR4A4PQ8NGN8 299 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 PLPPR1Q8TBJ4 325 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 CASTOR1Q8WTX7 329 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 SEBOXQ9HB31 216 aaPredicted RBP24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 CHD8Q9HCK8 2581 aa24.53■■□□□ 1.52
CTDNEP1-208ENST00000573600 A0A0B4J2A0 478 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 IGHV1-46P01743 117 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 SCTP09683 121 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 OR4A8P0C604 315 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 KCNJ3P48549 501 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 H2BFSP57053 126 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 HERV-K104P61576 105 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 HLA-DRB3P79483 266 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 TNFAIP6P98066 277 aaPredicted RBP24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 SORDQ00796 357 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 ERGIC1Q969X5 290 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 SHPKQ9UHJ6 478 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 NKX2-6A6NCS4 301 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 RGS11O94810 467 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 DIRAS3O95661 229 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 SEC61A1P61619 476 aaKnown RBP24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 ADAM5Q6NVV9 412 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 MOGAT3Q86VF5 341 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 OR5M8Q8NGP6 311 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 ERRFI1Q9UJM3 462 aaPredicted RBP24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 PCDHB10Q9UN67 800 aa24.52■■□□□ 1.52
CTDNEP1-208ENST00000573600 SIX6O95475 246 aa24.51■■□□□ 1.51
CTDNEP1-208ENST00000573600 CLEC18BQ6UXF7 455 aa24.51■■□□□ 1.51
CTDNEP1-208ENST00000573600 CA5BP1Q8WTZ4 195 aa24.51■■□□□ 1.51
CTDNEP1-208ENST00000573600 TOMM40LQ969M1 308 aa24.51■■□□□ 1.51
CTDNEP1-208ENST00000573600 OPN4Q9UHM6 478 aa24.51■■□□□ 1.51
CTDNEP1-208ENST00000573600 PPYP01298 95 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 ADH4P08319 380 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 CEBPDP49716 269 aaPredicted RBP24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 SLC38A6Q8IZM9 456 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 OR5T2Q8NGG2 359 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 COQ8AQ8NI60 647 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 PIK3IP1Q96FE7 263 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 PLPPR2Q96GM1 343 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 KCNJ16Q9NPI9 418 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 WIPI2Q9Y4P8 454 aa24.5■■□□□ 1.51
CTDNEP1-208ENST00000573600 RFPL4AA6NLU0 287 aa24.49■■□□□ 1.51
CTDNEP1-208ENST00000573600 RFPL4AL1F8VTS6 287 aa24.49■■□□□ 1.51
CTDNEP1-208ENST00000573600 AADACP22760 399 aa24.49■■□□□ 1.51
CTDNEP1-208ENST00000573600 NFYAP23511 347 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms