RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 AIREO43918 545 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 MPIG6BO95866 241 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 VSIG8P0DPA2 414 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 CFPP27918 469 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 P2RX3P56373 397 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 BPIFB3P59826 476 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 PDCD1Q15116 288 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 TAF9Q16594 264 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 ATAD3CQ5T2N8 411 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 TMEM104Q8NE00 496 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 Q96M66 194 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-213ENST00000573577 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 METTL8Q9H825 291 aaKnown RBP11.13□□□□□ -0.63
RPAIN-213ENST00000573577 LINC00312Q9Y6C7 94 aa11.13□□□□□ -0.63
RPAIN-213ENST00000573577 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 AIPO00170 330 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 HSPB6O14558 160 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 MMP9P14780 707 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 OR10A3P58181 314 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 PAX5Q02548 391 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 RBM39Q14498 530 aaKnown RBP11.12□□□□□ -0.63
RPAIN-213ENST00000573577 P2RY14Q15391 338 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 FAM189A2Q15884 450 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 KRBOX4Q5JUW0 171 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 HES5Q5TA89 166 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 NCR3LG1Q68D85 454 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 SUMF2Q8NBJ7 301 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 OR13F1Q8NGS4 319 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
RPAIN-213ENST00000573577 URM1Q9BTM9 101 aaKnown RBP11.12□□□□□ -0.63
RPAIN-213ENST00000573577 MS4A7Q9GZW8 240 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-213ENST00000573577 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 MCRIP1C9JLW8 97 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 RBP4P02753 201 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 GLAP06280 429 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 ZNF728P0DKX0 622 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 FUT3P21217 361 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 SDC2P34741 201 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 RPS27AP62979 156 aaKnown RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 AESQ08117 197 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 ATXN7L3Q14CW9 347 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 OR10K2Q6IF99 312 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 METAP1DQ6UB28 335 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 OR51D1Q8NGF3 324 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 ZFAND2BQ8WV99 257 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 NCOR1P1Q9H4R4 102 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 RCC2Q9P258 522 aaKnown RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
RPAIN-213ENST00000573577 UBE2J1Q9Y385 318 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-213ENST00000573577 ODAMA1E959 279 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 PDCD6O75340 191 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 PRTN3P24158 256 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 GLIPR1P48060 266 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 CLDN12P56749 244 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 QRFPP83859 136 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 UNC119Q13432 240 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 ZNF273Q14593 569 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 C2orf76Q3KRA6 126 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 RAB12Q6IQ22 244 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 GPR141Q7Z602 305 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 CROCCP3Q8IVE0 287 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 TAS2R3Q9NYW6 316 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 RAB22AQ9UL26 194 aa11.1□□□□□ -0.63
RPAIN-213ENST00000573577 PEX16Q9Y5Y5 336 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms