RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 A0A1W2PP55 124 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1W2PQD3 144 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 CD5P06127 495 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 PPP1CAP62136 330 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SNAI3Q3KNW1 292 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 Q5BKY6 102 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 AMMECR1LQ6DCA0 310 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 HES4Q9HCC6 221 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 BCAT2O15382 392 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 CHST1O43916 411 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SRSF10O75494 262 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 H2BFSP57053 126 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF121P58317 390 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 GNG3P63215 75 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 HIST1H1AQ02539 215 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 HIST3H2BBQ8N257 126 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 AQP3Q92482 292 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 TNFRSF14Q92956 283 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SLC25A22Q9H936 323 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 MPC1Q9Y5U8 109 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SERTM2A0A1B0GWG4 89 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 FAM221AA4D161 298 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 SRP19P09132 144 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 MYBPHQ13203 477 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 VMA21Q3ZAQ7 101 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 PLAC9Q5JTB6 97 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 KMT5CQ86Y97 462 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 LSM10Q969L4 123 aaKnown RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 CNRIP1Q96F85 164 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-216ENST00000569240 C20orf144Q9BQM9 153 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 CHRNA10Q9GZZ6 450 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 NGBQ9NPG2 151 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 ANKRD10Q9NXR5 420 aa6.29□□□□□ -1.4
CNOT1-216ENST00000569240 PPYP01298 95 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 JMJD7P0C870 316 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CSRP3P50461 194 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 RPS15P62841 145 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 HSD17B10Q99714 261 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TRBV6-7A0A0A0MS04 114 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TRAV1-1A0A0B4J248 108 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 A0A1W2PRS3 328 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 PAGE4O60829 102 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 OTX2P32243 289 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 MEF2CQ06413 473 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 ABHD17BQ5VST6 288 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CST9Q5W186 159 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 GUCD1Q96NT3 240 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CDCA3Q99618 268 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TINAGQ9UJW2 476 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 NAT6Q93015 286 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 LANCL2Q9NS86 450 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 FBLN5Q9UBX5 448 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 PEX11BO96011 259 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 Q6AWC8 147 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 LAIR2Q6ISS4 152 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM222Q9H0R3 208 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF257Q9Y2Q1 563 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 KIF13BQ9NQT8 1826 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CRYM-AS1A6NIL9 109 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 RAB29O14966 203 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SLC25A17O43808 307 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SMIM17P0DL12 118 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CLEC12BQ2HXU8 276 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF260Q3ZCT1 412 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 OR10J3Q5JRS4 329 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 RHBDD1Q8TEB9 315 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TPPP3Q9BW30 176 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 HEXA-AS1Q9H8Q6 139 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 PRNDQ9UKY0 176 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF835Q9Y2P0 537 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 ANKRD36CQ5JPF3 1778 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SCN11AQ9UI33 1791 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 FTH1P19P0C7X4 201 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 RUNX3Q13761 415 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 TEX29Q8N6K0 151 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 OR4S2Q8NH73 311 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 C11orf40Q8WZ69 217 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 DMRTA2Q96SC8 542 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 SLC25A2Q9BXI2 301 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 REG4Q9BYZ8 158 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 UBTD1Q9HAC8 227 aa6.28□□□□□ -1.4
CNOT1-216ENST00000569240 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
CNOT1-216ENST00000569240 CDIPTO14735 213 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 IL4P05112 153 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 IQCF3P0C7M6 154 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 COMPP49747 757 aaPredicted RBP6.27□□□□□ -1.4
CNOT1-216ENST00000569240 RASL11AQ6T310 242 aa6.27□□□□□ -1.4
CNOT1-216ENST00000569240 FBXL14Q8N1E6 418 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms