RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 FBLIM1Q8WUP2 373 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 C4orf36Q96KX1 117 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 RBM14Q96PK6 669 aaKnown RBP14.92□□□□□ -0.02
LINC01238-205ENST00000567549 BARHL1Q9BZE3 327 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 IL36RNQ9UBH0 155 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 BLOC1S6Q9UL45 172 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 ZNF281Q9Y2X9 895 aa14.92□□□□□ -0.02
LINC01238-205ENST00000567549 TCRBV4S1A1TA0A5B7 111 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 IGLV1-47P01700 117 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 C21orf33P30042 268 aaPredicted RBP14.91□□□□□ -0.02
LINC01238-205ENST00000567549 KCNJ3P48549 501 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 CD83Q01151 205 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 AESQ08117 197 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 GALEQ14376 348 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 HLA-DRB5Q30154 266 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 KIAA2026Q5HYC2 2103 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 LDLRAD2Q5SZI1 272 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 TSPAN14Q8NG11 270 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 OR9G1Q8NH87 305 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 RFT1Q96AA3 541 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 RPEQ96AT9 228 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 OCSTAMPQ9BR26 566 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 MRPS26Q9BYN8 205 aaKnown RBP14.91□□□□□ -0.02
LINC01238-205ENST00000567549 NCOR1P1Q9H4R4 102 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 DHDHQ9UQ10 334 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 EXOGQ9Y2C4 368 aaKnown RBP14.91□□□□□ -0.02
LINC01238-205ENST00000567549 NOTCH3Q9UM47 2321 aa14.91□□□□□ -0.02
LINC01238-205ENST00000567549 A0A087WXM4 84 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 A0A087X0M5 115 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 A0A1B0GX30 115 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 BUB1B-PAK6H3BSN5 160 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 CD2P06729 351 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 GBX2P52951 348 aaPredicted RBP14.9□□□□□ -0.02
LINC01238-205ENST00000567549 KISS1Q15726 138 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 OXLD1Q5BKU9 147 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 OR51D1Q8NGF3 324 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 OR5D18Q8NGL1 313 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 OR5AK2Q8NH90 309 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 TSEN15Q8WW01 171 aaKnown RBP14.9□□□□□ -0.02
LINC01238-205ENST00000567549 DPF1Q92782 380 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 PELI1Q96FA3 418 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 RCC1LQ96I51 464 aaKnown RBP14.9□□□□□ -0.02
LINC01238-205ENST00000567549 GPER1Q99527 375 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 ALG8Q9BVK2 526 aa14.9□□□□□ -0.02
LINC01238-205ENST00000567549 KBTBD11-OT1A0A1B0GTJ5 212 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 OR4C45A6NMZ5 311 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 J3QRE1 110 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 RAB3AP20336 220 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 GLIPR1P48060 266 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 NANOS3P60323 173 aaKnown RBP14.89□□□□□ -0.03
LINC01238-205ENST00000567549 RAB40BQ12829 278 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 RBM39Q14498 530 aaKnown RBP14.89□□□□□ -0.03
LINC01238-205ENST00000567549 ABCA11PQ4W5N1 156 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 KHDC1LQ5JSQ8 128 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 TPTE2P1Q5T6R2 138 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 Q6ZPA2 131 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 SLC16A12Q6ZSM3 486 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 PARP16Q8N5Y8 322 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 WFDC9Q8NEX5 89 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 PXT1Q8NFP0 134 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 OR10A7Q8NGE5 316 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 RHOXF1Q8NHV9 184 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 TOMM40LQ969M1 308 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 PHF21AQ96BD5 680 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 SCN3BQ9NY72 215 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 ZMAT5Q9UDW3 170 aaKnown RBP14.89□□□□□ -0.03
LINC01238-205ENST00000567549 MOB4Q9Y3A3 225 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 TPRKBQ9Y3C4 175 aa14.89□□□□□ -0.03
LINC01238-205ENST00000567549 PRKDCP78527 4128 aaKnown RBP14.88□□□□□ -0.03
LINC01238-205ENST00000567549 A0A1W2PRX2 142 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 SLC33A1O00400 549 aaPredicted RBP14.88□□□□□ -0.03
LINC01238-205ENST00000567549 LPLP06858 475 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 CALCBP10092 127 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 NFYBP25208 207 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 KLHL22Q53GT1 634 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 PAN3Q58A45 887 aaKnown RBP14.88□□□□□ -0.03
LINC01238-205ENST00000567549 ELP2Q6IA86 826 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 THNSL2Q86YJ6 484 aa14.88□□□□□ -0.03
LINC01238-205ENST00000567549 PAK1IP1Q9NWT1 392 aaPredicted RBP14.88□□□□□ -0.03
LINC01238-205ENST00000567549 IGKV1-12A0A0C4DH73 117 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 ADARB2-AS1A8MUL3 147 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 MMP23AO75900 390 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 IGKV1D-12P01611 117 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 SLC6A1P30531 599 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 GLP1RP43220 463 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 OR3A4PP47883 348 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 RAB7AP51149 207 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 GABARAPL2P60520 117 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 DCTN2Q13561 401 aaKnown RBP14.87□□□□□ -0.03
LINC01238-205ENST00000567549 IL13RA2Q14627 380 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 ATXN7L3Q14CW9 347 aaPredicted RBP14.87□□□□□ -0.03
LINC01238-205ENST00000567549 C9orf152Q5JTZ5 239 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 OR51A4Q8NGJ6 313 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 OR51T1Q8NGJ9 327 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 LGALS12Q96DT0 336 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 SPACA5Q96QH8 159 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 S100A13Q99584 98 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 ZNF286AQ9HBT8 521 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 RAB9BQ9NP90 201 aa14.87□□□□□ -0.03
LINC01238-205ENST00000567549 RPL36Q9Y3U8 105 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms