RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RASL12Q9NYN1 266 aa11.14□□□□□ -0.63
CLK3-218ENST00000566926 NUP50Q9UKX7 468 aa11.14□□□□□ -0.63
CLK3-218ENST00000566926 CUBNO60494 3623 aa11.14□□□□□ -0.63
CLK3-218ENST00000566926 GABARAPH6UMI1 98 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 DVL1O14640 695 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 NDUFB3O43676 98 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 MPIG6BO95866 241 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 FSHBP01225 129 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 HLA-DQB1P01920 261 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 GSTP1P09211 210 aaKnown RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 SERPINA2P20848 420 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 EFNB2P52799 333 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 TAS2R20P59543 309 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 HOXA4Q00056 320 aaPredicted RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 LRRC10Q5BKY1 277 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 STUMQ69YW2 141 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 HAGHLQ6PII5 290 aaPredicted RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 OR8H2Q8N162 312 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 OSR2Q8N2R0 312 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 SMIM4Q8WVI0 70 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 AQP3Q92482 292 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 DACT3Q96B18 629 aaPredicted RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 CCL13Q99616 98 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 LPAR5Q9H1C0 372 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 NLKQ9UBE8 527 aa11.13□□□□□ -0.63
CLK3-218ENST00000566926 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
CLK3-218ENST00000566926 RAB27BO00194 218 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 SPRY1O43609 319 aaPredicted RBP11.12□□□□□ -0.63
CLK3-218ENST00000566926 NOS1APO75052 506 aaPredicted RBP11.12□□□□□ -0.63
CLK3-218ENST00000566926 CA11O75493 328 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 RHBDL1O75783 438 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 HTR3BO95264 441 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 INPP1P49441 399 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 AP3S2P59780 193 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 GMFBP60983 142 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 FGF12P61328 243 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 RBMS3Q6XE24 437 aaKnown RBP11.12□□□□□ -0.63
CLK3-218ENST00000566926 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 OR51T1Q8NGJ9 327 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 FCAMRQ8WWV6 532 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 ST8SIA4Q92187 359 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 UPRTQ96BW1 309 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 Q96M66 194 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 SDHCQ99643 169 aaPredicted RBP11.12□□□□□ -0.63
CLK3-218ENST00000566926 NKX3-1Q99801 234 aaPredicted RBP11.12□□□□□ -0.63
CLK3-218ENST00000566926 SELENOIQ9C0D9 397 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 SPACA1Q9HBV2 294 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLK3-218ENST00000566926 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
CLK3-218ENST00000566926 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 C22orf46C9J442 243 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 PLATP00750 562 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 MELTFP08582 738 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 IL7P13232 177 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 PRSS3P35030 304 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 BPIFB3P59826 476 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 IL13RA1P78552 427 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 IL13RA2Q14627 380 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 PNLIPRP3Q17RR3 467 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 RGS21Q2M5E4 152 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 DMRTC1Q5HYR2 192 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 ZNF788Q6ZQV5 615 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 POC1AQ8NBT0 407 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 THAP7Q9BT49 309 aaPredicted RBP11.11□□□□□ -0.63
CLK3-218ENST00000566926 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
CLK3-218ENST00000566926 WDR13Q9H1Z4 485 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 KCNK15Q9H427 330 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 ABCB10Q9NRK6 738 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
CLK3-218ENST00000566926 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
CLK3-218ENST00000566926 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
CLK3-218ENST00000566926 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 SIGLEC5O15389 551 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 TOX4O94842 621 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 LPLP06858 475 aa11.1□□□□□ -0.63
CLK3-218ENST00000566926 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms