RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 HAVCR2Q8TDQ0 301 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
RNF40-209ENST00000566703 SPACA5Q96QH8 159 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 LINC00574Q9H8X3 128 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 NOTCH3Q9UM47 2321 aa11.94□□□□□ -0.5
RNF40-209ENST00000566703 TMEM212A6NML5 194 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 SULT1B1O43704 296 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 HCKP08631 526 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 C21orf33P30042 268 aaPredicted RBP11.93□□□□□ -0.5
RNF40-209ENST00000566703 PAX5Q02548 391 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 OSR2Q8N2R0 312 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 Q8NFD4 153 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 RPEQ96AT9 228 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 KIRREL1Q96J84 757 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 INPP5EQ9NRR6 644 aa11.93□□□□□ -0.5
RNF40-209ENST00000566703 AMMECR1Q9Y4X0 333 aaPredicted RBP11.93□□□□□ -0.5
RNF40-209ENST00000566703 J3QR06 171 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 MPZL2O60487 215 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 ZFPL1O95159 310 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 FADS2O95864 444 aaKnown RBP11.92□□□□□ -0.5
RNF40-209ENST00000566703 CCDC159P0C7I6 412 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 OR3A4PP47883 348 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 KCNJ3P48549 501 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 ALDH3A2P51648 485 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 IL13RA2Q14627 380 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 LHFPL3Q86UP9 236 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 Q96MT0 163 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 ALG8Q9BVK2 526 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 HSPE1-MOB4S4R3N1 261 aa11.92□□□□□ -0.5
RNF40-209ENST00000566703 FAM172BPA6NC97 362 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 NPIPB11E5RHQ5 1161 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 H0YJX3 145 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 EI24O14681 340 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 MPIG6BO95866 241 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 GABRB1P18505 474 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 NFYBP25208 207 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 SLC6A1P30531 599 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 RAB7AP51149 207 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
RNF40-209ENST00000566703 ATXN7L3Q14CW9 347 aaPredicted RBP11.91□□□□□ -0.5
RNF40-209ENST00000566703 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
RNF40-209ENST00000566703 ZFP1Q6P2D0 407 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 ASCL4Q6XD76 172 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 OR8H3Q8N146 312 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 OR5AK2Q8NH90 309 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 TOMM40LQ969M1 308 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 PPIL3Q9H2H8 161 aaKnown RBP11.91□□□□□ -0.5
RNF40-209ENST00000566703 ZFP57Q9NU63 452 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 MRPS18AQ9NVS2 196 aaKnown RBP11.91□□□□□ -0.5
RNF40-209ENST00000566703 ING3Q9NXR8 418 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 IDI2-AS1Q9NZ38 188 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 DHDHQ9UQ10 334 aa11.91□□□□□ -0.5
RNF40-209ENST00000566703 MEIKINA0A087WXM9 373 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 PSMB11A5LHX3 300 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 MAGEB3O15480 346 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 FGF16O43320 207 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 IL1AP01583 271 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 RAB3AP20336 220 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 GBX2P52951 348 aaPredicted RBP11.9□□□□□ -0.5
RNF40-209ENST00000566703 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 ZIK1Q3SY52 487 aaPredicted RBP11.9□□□□□ -0.5
RNF40-209ENST00000566703 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 ZNF529Q6P280 563 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 C10orf67Q8IYJ2 551 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 OR51D1Q8NGF3 324 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 ISG20L2Q9H9L3 353 aaKnown RBP11.9□□□□□ -0.5
RNF40-209ENST00000566703 ERVK13-1Q9NX77 482 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 KIF25Q9UIL4 384 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 GMPPBQ9Y5P6 360 aa11.9□□□□□ -0.5
RNF40-209ENST00000566703 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 SH2D7A6NKC9 451 aaPredicted RBP11.89□□□□□ -0.51
RNF40-209ENST00000566703 K7EIL1 84 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
RNF40-209ENST00000566703 GZMHP20718 246 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 GLP1RP43220 463 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 EGFEM1PQ0D2K5 195 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 RAB40BQ12829 278 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 UTF1Q5T230 341 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 COMMD1Q8N668 190 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 LINC00482Q8N8I6 264 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 OR13A1Q8NGR1 328 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 NR1H4Q96RI1 486 aaPredicted RBP11.89□□□□□ -0.51
RNF40-209ENST00000566703 PSG11Q9UQ72 335 aa11.89□□□□□ -0.51
RNF40-209ENST00000566703 A0A1W2PPI3 338 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 E9PI62 339 aa11.88□□□□□ -0.51
RNF40-209ENST00000566703 TMEM11P17152 192 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms