RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 FAM90A16PA6NEW6 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A20PA6NIJ5 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A8PA6NJQ4 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A7PA6NKC0 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A22PA8MWA6 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A12PA8MX19 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A5PA8MXJ8 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A23PA8MXZ1 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 NAPSAO96009 420 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A15PP0C7V4 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A13PP0C7W8 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A14PP0C7W9 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 FAM90A24PP0C7X0 464 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 JMJD7P0C870 316 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 BCL3P20749 454 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 AKIRIN2Q53H80 203 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 PSMF1Q92530 271 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
SCAPER-215ENST00000565507 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
SCAPER-215ENST00000565507 C7orf77A4D0Y5 90 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 K7N7A8 449 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 GDF1P27539 372 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 GNMTQ14749 295 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCAPER-215ENST00000565507 FAM185AQ8N0U4 392 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
SCAPER-215ENST00000565507 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 Q9N2K0 584 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 MED19A0JLT2 244 aaPredicted RBP11.29□□□□□ -0.6
SCAPER-215ENST00000565507 FAM24AA6NFZ4 105 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 CYB561P49447 251 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 ZNF818PQ6ZRF7 136 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 DPPA2Q7Z7J5 298 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 TBC1D26Q86UD7 250 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 SLAMF9Q96A28 289 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
SCAPER-215ENST00000565507 CEP295Q9C0D2 2601 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 CACNA1GO43497 2377 aa11.29□□□□□ -0.6
SCAPER-215ENST00000565507 IGSF23A1L1A6 192 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 B4E171 279 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PRH1P02810 166 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 SCTP09683 121 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PPP1CCP36873 323 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 TSPAN7P41732 249 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 RND3P61587 244 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 SRPXP78539 464 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PAPOLGQ9BWT3 736 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 FREM1Q5H8C1 2179 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 IFNA4P05014 189 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 ZNF44P15621 663 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PTAFRP25105 342 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 FGF12P61328 243 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PRDX4Q13162 271 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 RNF212Q495C1 297 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 C6orf15Q6UXA7 325 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 PRRG4Q9BZD6 226 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 FAM86C1Q9NVL1 165 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
SCAPER-215ENST00000565507 NOSIPQ9Y314 301 aaKnown RBP11.28□□□□□ -0.6
SCAPER-215ENST00000565507 IGKV1D-13A0A0B4J2D9 117 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 ZNF503-AS2A6NEH8 195 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 MRPL33O75394 65 aaKnown RBP11.27□□□□□ -0.6
SCAPER-215ENST00000565507 TUSC2O75896 110 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 SLC34A2O95436 690 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 MT-ND4LP03901 98 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 SERPINA7P05543 415 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 IGKV1-13P0DP09 117 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 CCL2P13500 99 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 HAAOP46952 286 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 GPM6AP51674 278 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 FOXG1P55316 489 aaPredicted RBP11.27□□□□□ -0.6
SCAPER-215ENST00000565507 RAB5BP61020 215 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.6
SCAPER-215ENST00000565507 SPINK14Q6IE38 97 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 SAXO1Q8IYX7 474 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 GAPTQ8N292 157 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 SUMF1Q8NBK3 374 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 ISOC2Q96AB3 205 aa11.27□□□□□ -0.6
SCAPER-215ENST00000565507 TAAR9Q96RI9 348 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms