RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HES5Q5TA89 166 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 OR2W3Q7Z3T1 314 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 OR51D1Q8NGF3 324 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 C22orf15Q8WYQ4 148 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 FAM3DQ96BQ1 224 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 C1orf147Q96MC9 270 aaPredicted RBP13.13□□□□□ -0.31
RAB40C-208ENST00000564703 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 NEDD4LQ96PU5 975 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 GFI1Q99684 422 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 GAL3ST2Q9H3Q3 398 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 ZNF69Q9UC07 566 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
RAB40C-208ENST00000564703 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
RAB40C-208ENST00000564703 KIAA2026Q5HYC2 2103 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 MEIKINA0A087WXM9 373 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 ODAMA1E959 279 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 IFITM5A6NNB3 132 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 AIREO43918 545 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 CCL3L1P16619 93 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 ZNF273Q14593 569 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 OR10K2Q6IF99 312 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-208ENST00000564703 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 Q8N7P7 452 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 CORO2AQ92828 525 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 Q96M66 194 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 SUCNR1Q9BXA5 334 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 MRPS26Q9BYN8 205 aaKnown RBP13.12□□□□□ -0.31
RAB40C-208ENST00000564703 NCOR1P1Q9H4R4 102 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 TAS2R3Q9NYW6 316 aa13.12□□□□□ -0.31
RAB40C-208ENST00000564703 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
RAB40C-208ENST00000564703 NOTOA8MTQ0 251 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 C17orf98A8MV24 154 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 TCF21O43680 179 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 GLAP06280 429 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 SDC2P34741 201 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 CLDN12P56749 244 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 OR10A3P58181 314 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
RAB40C-208ENST00000564703 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 ZDHHC16Q969W1 377 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 JMJD8Q96S16 334 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 UNKLQ9H9P5 680 aaKnown RBP13.11□□□□□ -0.31
RAB40C-208ENST00000564703 RAB22AQ9UL26 194 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 FAM96BQ9Y3D0 163 aa13.11□□□□□ -0.31
RAB40C-208ENST00000564703 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 SHISA3A0PJX4 238 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 TMEM14DPA8MWL7 114 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 AIPO00170 330 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 RBP4P02753 201 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 GZMHP20718 246 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 UBE2E1P51965 193 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 LGALS4P56470 323 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 MXD1Q05195 221 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 OR13D1Q8NGV5 346 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 COQ2Q96H96 371 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 CENPOQ9BU64 300 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 ETAA1Q9NY74 926 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 KIF25Q9UIL4 384 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
RAB40C-208ENST00000564703 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 ZNF729A6NN14 1252 aaPredicted RBP13.09□□□□□ -0.31
RAB40C-208ENST00000564703 PDCD6O75340 191 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 CA11O75493 328 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 BLVRBP30043 206 aaPredicted RBP13.09□□□□□ -0.31
RAB40C-208ENST00000564703 QRFPP83859 136 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 NKAPLQ5M9Q1 402 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 RSBN1Q5VWQ0 802 aaPredicted RBP13.09□□□□□ -0.31
RAB40C-208ENST00000564703 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 TM2D1Q9BX74 207 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 LIN7BQ9HAP6 207 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 ZNF581Q9P0T4 197 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 DSCAML1Q8TD84 2053 aa13.09□□□□□ -0.31
RAB40C-208ENST00000564703 A0A1W2PRD5 423 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 A0A1W2PRF3 423 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 A0A1W2PRM7 423 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 UBE2QL1A1L167 161 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 SMIM30A4D0T7 59 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 IGHV1-8P0DP01 117 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 GLP1RP43220 463 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 DLX6P56179 175 aa13.08□□□□□ -0.32
RAB40C-208ENST00000564703 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms